Closed aspnetcs closed 1 year ago
Sorry, the dataset is privacy-preserving by the hospital.
能给出一个示例数据集吗?不然,程序没法运行,咋办?
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在 2022-11-22 13:33:21,"Zhongyi Han" @.***> 写道:
Closed #1 as completed.
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I am sorry for the inconvenience caused by the private data collected from real COVID-19 patients. You may refer to existing public datasets, such as the Kaggle dataset: https://www.kaggle.com/datasets/andrewmvd/covid19-ct-scans. The first step is the segmentation using 3D-Unet, which is easily applicable.
好的,我先试试
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At 2022-11-22 16:10:25, "Zhongyi Han" @.***> wrote:
I am sorry for the inconvenience caused by the private data collected from real COVID-19 patients. You may refer to existing public datasets, such as the Kaggle dataset: https://www.kaggle.com/datasets/andrewmvd/covid19-ct-scans. The first step is the segmentation using 3D-Unet, which is easily applicable.
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3D-Unet在哪里?https://github.com/pykao/Modified-3D-UNet-Pytorch 是这个吗?
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At 2022-11-22 16:10:25, "Zhongyi Han" @.***> wrote:
I am sorry for the inconvenience caused by the private data collected from real COVID-19 patients. You may refer to existing public datasets, such as the Kaggle dataset: https://www.kaggle.com/datasets/andrewmvd/covid19-ct-scans. The first step is the segmentation using 3D-Unet, which is easily applicable.
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Segmentation of lung masks: preprocess/seg.py for binary classification and preprocess/seg-multi-class.py for multi-class classification;
好的,我试一下
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At 2022-11-23 08:42:10, "Zhongyi Han" @.***> wrote:
Segmentation of lung masks: preprocess/seg.py for binary classification and preprocess/seg-multi-class.py for multi-class classification;
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@.***:/home/AD3DMIL-master/preprocess# python seg.py ../../COVID-CT-master/Images-processed/CT_COVID/kjr-21-e24-p2-8.png
File "seg.py", line 18
sys.exit(f'File not found: {string}')
^
SyntaxError: invalid syntax
用seg.py分割,怎么错了?如何使用这个seg.py进行分割?
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At 2022-11-23 08:42:10, "Zhongyi Han" @.***> wrote:
Segmentation of lung masks: preprocess/seg.py for binary classification and preprocess/seg-multi-class.py for multi-class classification;
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png图片格式好像不行,需要3D的CT数据,请查看具体的dataloader需求格式
好的,我再试试
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在 2022-11-24 13:37:01,"Zhongyi Han" @.***> 写道:
png图片格式好像不行,需要3D的CT数据,请查看具体的dataloader需求格式
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@.***:/home/AD3DMIL-master/preprocess# python seg.py ../../kaggle-covid/ct_scans/coronacases_org_001.nii
File "seg.py", line 18
sys.exit(f'File not found: {string}')
^
SyntaxError: invalid syntax
kaggle-covid/ct_scans/coronacases_org_001.nii 文件都是从kaggle上下载的 covid-19 文件,但是这样分割也出错了,nii是3d文件?咋办?
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在 2022-11-24 13:37:01,"Zhongyi Han" @.***> 写道:
png图片格式好像不行,需要3D的CT数据,请查看具体的dataloader需求格式
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Would you like to provide the dataset for testing?