zitmen / thunderstorm

ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
http://zitmen.github.io/thunderstorm/
GNU General Public License v3.0
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1.2 to 1.3 autoupgrade error (Fiji; OSX 10.10.1) #17

Closed zitmen closed 9 years ago

zitmen commented 9 years ago
Thanks so much for developing (and more importantly, maintaining) such a useful program...
only a minor error w/ the auto update function.

What steps will reproduce the problem?
Unknown if reproducible. See description.

What is the expected output? What do you see instead?
Expect upgrade (and Iprompt to restart). Instead get ImageJ exception box w/ output:

(Fiji Is Just) ImageJ 2.0.0-rc-15/1.49m; Java 1.6.0_65 [64-bit]; Mac OS X 10.10.1;
42MB of 4721MB (<1%)

java.lang.NegativeArraySizeException
    at cz.cuni.lf1.lge.ThunderSTORM.UpdaterPlugIn.getJar(UpdaterPlugIn.java:117)
    at cz.cuni.lf1.lge.ThunderSTORM.UpdaterPlugIn.run(UpdaterPlugIn.java:58)
    at ij.IJ.runUserPlugIn(IJ.java:202)
    at ij.IJ.runPlugIn(IJ.java:166)
    at ij.Executer.runCommand(Executer.java:131)
    at ij.Executer.run(Executer.java:64)
    at java.lang.Thread.run(Thread.java:695)

What version of the product are you using? On what operating system?
ThunderSTORM 1.2 -> 1.3 upgrade attempt; FIJI (ImageJ 2.0.0-rc-15/1.49m; Java 1.6.0_65
(64 bit)

Please provide any additional information below.
Downloaded .jar and renamed/installed per instructions. Worked no problem.

Original issue reported on code.google.com by zhensel on 2014-12-15 00:35:42

zitmen commented 9 years ago
Hi, we are aware of this error. This is due to change in way the Google Drive does file
transsactions. Simply downloading the new version from the website will fix this and
additional updates can be then performed via the updater.
There was info about this on the homepage, but with the new release we have removed
it. Maybe, I should put it back :)

Original issue reported on code.google.com by zitmen on 2014-12-15 10:56:07