zjf014 / hydro-opendata

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用pip安装,没有科学上网时,容易挂掉 #1

Closed OuyangWenyu closed 11 months ago

OuyangWenyu commented 1 year ago

Description

使用pip安装 wis-s3api的时候,平台上容易安装不成功,源码的话,能否把相关的使用教程再写详细点?

What I Did

(base) ouyangwenyu@vm-jupyterhub-server:~$ conda activate test
(test) ouyangwenyu@vm-jupyterhub-server:~$ pip install wis-s3api
Defaulting to user installation because normal site-packages is not writeable
Collecting wis-s3api
  Downloading wis-s3api-0.0.7.tar.gz (8.1 kB)
  Preparing metadata (setup.py) ... done
Requirement already satisfied: numpy in /opt/conda/lib/python3.9/site-packages (from wis-s3api) (1.24.2)
Collecting s3fs
  Downloading s3fs-2023.4.0-py3-none-any.whl (28 kB)
Collecting netCDF4
  Downloading netCDF4-1.6.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (5.2 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.2/5.2 MB 10.8 kB/s eta 0:00:00
Requirement already satisfied: xarray in /opt/conda/lib/python3.9/site-packages (from wis-s3api) (2022.6.0)
Collecting geopandas
  Downloading geopandas-0.12.2-py3-none-any.whl (1.1 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 14.4 kB/s eta 0:00:00
Collecting pyproj>=2.6.1.post1
  Downloading pyproj-3.5.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.8 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.8/7.8 MB 20.6 kB/s eta 0:00:00
Collecting fiona>=1.8
  Downloading Fiona-1.9.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (16.1 MB)
     ━━━━━━━╺━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.0/16.1 MB 10.4 kB/s eta 0:21:03
ERROR: Exception:
Traceback (most recent call last):
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/urllib3/response.py", line 438, in _error_catcher
    yield
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/urllib3/response.py", line 561, in read
    data = self._fp_read(amt) if not fp_closed else b""
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/urllib3/response.py", line 527, in _fp_read
    return self._fp.read(amt) if amt is not None else self._fp.read()
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/cachecontrol/filewrapper.py", line 90, in read
    data = self.__fp.read(amt)
  File "/opt/conda/lib/python3.9/http/client.py", line 463, in read
    n = self.readinto(b)
  File "/opt/conda/lib/python3.9/http/client.py", line 507, in readinto
    n = self.fp.readinto(b)
  File "/opt/conda/lib/python3.9/socket.py", line 704, in readinto
    return self._sock.recv_into(b)
  File "/opt/conda/lib/python3.9/ssl.py", line 1242, in recv_into
    return self.read(nbytes, buffer)
  File "/opt/conda/lib/python3.9/ssl.py", line 1100, in read
    return self._sslobj.read(len, buffer)
socket.timeout: The read operation timed out

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper
    status = run_func(*args)
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 247, in wrapper
    return func(self, options, args)
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/commands/install.py", line 419, in run
    requirement_set = resolver.resolve(
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
    result = self._result = resolver.resolve(
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve
    state = resolution.resolve(requirements, max_rounds=max_rounds)
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 373, in resolve
    failure_causes = self._attempt_to_pin_criterion(name)
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 213, in _attempt_to_pin_criterion
    criteria = self._get_updated_criteria(candidate)
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 204, in _get_updated_criteria
    self._add_to_criteria(criteria, requirement, parent=candidate)
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 172, in _add_to_criteria
    if not criterion.candidates:
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/resolvelib/structs.py", line 151, in __bool__
    return bool(self._sequence)
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
    return any(self)
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
    return (c for c in iterator if id(c) not in self._incompatible_ids)
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
    candidate = func()
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
    self._link_candidate_cache[link] = LinkCandidate(
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 297, in __init__
    super().__init__(
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 162, in __init__
    self.dist = self._prepare()
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 231, in _prepare
    dist = self._prepare_distribution()
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 308, in _prepare_distribution
    return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 491, in prepare_linked_requirement
    return self._prepare_linked_requirement(req, parallel_builds)
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 536, in _prepare_linked_requirement
    local_file = unpack_url(
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 166, in unpack_url
    file = get_http_url(
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 107, in get_http_url
    from_path, content_type = download(link, temp_dir.path)
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/network/download.py", line 147, in __call__
    for chunk in chunks:
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/cli/progress_bars.py", line 53, in _rich_progress_bar
    for chunk in iterable:
  File "/opt/conda/lib/python3.9/site-packages/pip/_internal/network/utils.py", line 63, in response_chunks
    for chunk in response.raw.stream(
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/urllib3/response.py", line 622, in stream
    data = self.read(amt=amt, decode_content=decode_content)
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/urllib3/response.py", line 587, in read
    raise IncompleteRead(self._fp_bytes_read, self.length_remaining)
  File "/opt/conda/lib/python3.9/contextlib.py", line 137, in __exit__
    self.gen.throw(typ, value, traceback)
  File "/opt/conda/lib/python3.9/site-packages/pip/_vendor/urllib3/response.py", line 443, in _error_catcher
    raise ReadTimeoutError(self._pool, None, "Read timed out.")
pip._vendor.urllib3.exceptions.ReadTimeoutError: HTTPSConnectionPool(host='files.pythonhosted.org', port=443): Read timed out.
zjf014 commented 1 year ago

是的,主要是装gdal、geopandas的时候容易挂,而且gdal好像pip还不行

zjf014 commented 1 year ago

最好是先conda安装gdal和geopandas

OuyangWenyu commented 1 year ago

README里提到了从源码使用code,能补充完善下相关内容么,或者看下怎么打个conda的包?

huangjingyuan7 commented 1 year ago

使用pip安装 wis-s3api的时候,安装不成功,会否是版本不兼容问题,在改为pip install wis-s3api==0.0.2之后可以安装成功

zjf014 commented 1 year ago

使用pip安装 wis-s3api的时候,安装不成功,会否是版本不兼容问题,在改为pip install wis-s3api==0.0.2之后可以安装成功

有可能,提示啥错误呢

OuyangWenyu commented 11 months ago

我加了一个conda环境文件,用conda装没问题,请把pull request合一下吧