Hi! please refer to this issue: https://github.com/ventolab/CellphoneDB/issues/179
Could you add a parameter result_precision according to cpdb_statistical_analysis_method.call, which is default 3 but can be set to 5 when increasing test number to 1e5? like this:
def plot_cpdb(
...
result_precision: int = 3):
...
if df.at[i, "pvals"] == 0:
df.at[i, "pvals"] = 1**-result_precision
I'm not sure that if there are other places that need to be changed, Thank you for checking this!
Hi! please refer to this issue: https://github.com/ventolab/CellphoneDB/issues/179 Could you add a parameter
result_precision
according tocpdb_statistical_analysis_method.call
, which is default 3 but can be set to 5 when increasing test number to 1e5? like this:I'm not sure that if there are other places that need to be changed, Thank you for checking this!