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zoecastillo / microbiomeExplorer

The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or through a Shiny application. Written by Janina Reeder and Joseph N. Paulson.
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Warning: Error in scan: scan() expected 'a real', got '"3.784190"' 2: shiny::runApp 1: runMicrobiomeExplorer #10

Open ManarRashad opened 1 year ago

ManarRashad commented 1 year ago

I am trying several times to upload matrix file called: nares.csv; the following error always appears to me.

Warning: Error in scan: scan() expected 'a real', got '"3.784190"' 2: shiny::runApp 1: runMicrobiomeExplorer

Could you help me, please? Regards,

zoecastillo commented 1 year ago

Hello,

Are you able to share the matrix file?

It sounds like it is not formatted in the way microbiome Explorer expects it to be. Looking at the error, could simply be quotes around the numbers turning them into strings. You would need to save the csv without quotes.

Best, Janina