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zubata88 / mdgru

Code for Multi-dimensional Gated Recurrent Units for the Segmentation of Biomedical Data
GNU Lesser General Public License v2.1
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multiple checkpoints can now be provided at the same time. Added exam… #16

Closed zubata88 closed 6 years ago

zubata88 commented 6 years ago

…ples for 3d to demonstrate how to use this feature

This should address all but the last point in #10. I dont think completely ignoring the output is a good idea, as sometimes a new measure should be evaluated and then there is no way to compute this measure without running everything again. As labelmaps can be compressed substantially, I would suggest a new option, which allows to only save labelmaps and no probability maps. This should result in substantially less space requirements for the results, and new measures could be computed on the labelmaps at least.

zubata88 commented 6 years ago

As pointed out above, --only_save_labels will only save the labelmaps, which should require not much disk space when compressed. This should solve this issue.