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zudi-lin
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pytorch_connectomics
PyTorch Connectomics: segmentation toolbox for EM connectomics
http://connectomics.readthedocs.io/
MIT License
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enable multi-channel data loading
#104
Atharva-Chandak
closed
2 years ago
0
syntax error fixed in data_segmentation.py
#103
Atharva-Peshkar
closed
2 years ago
1
MitoEM combined training.
#102
Atharva-Peshkar
closed
2 years ago
0
Fixes #98 - Enable the use of `dataset_volume.py` for unsupervised cases (label/mask = None)
#101
Lauenburg
closed
2 years ago
0
Fix errors in distance transform prediction pipeline
#100
devaansh100
closed
2 years ago
0
Added CONFIG files for NagP data MitoEM.
#99
Atharva-Peshkar
closed
2 years ago
0
Bug: AttributeError in VolumeDataset when not providing a label list
#98
Lauenburg
opened
2 years ago
2
Add notebook to visualise distance transform
#97
devaansh100
closed
2 years ago
0
Updating neuron segmentation tutorial with details about waterz
#96
sid17291729
closed
2 years ago
0
Updating Neuron Segmentation tutorial to incorporate details about postprocessing using waterz
#95
sid17291729
closed
2 years ago
0
Update neuroglancer.rst
#94
Atom-101
closed
2 years ago
0
Very slow label smoothing with large input size
#93
Levishery
opened
2 years ago
1
Added MitoEM validation json files and updated docs on evaluation
#92
jasonkena
closed
2 years ago
0
New tutorial for neuroglancer
#91
emilk96
closed
2 years ago
0
A Problem
#90
Crystalqijing
closed
1 year ago
1
Add SwinTransformer2D,3D
#89
HarshSulakhe
opened
2 years ago
1
Multi volume training implemented.
#88
Atharva-Peshkar
closed
2 years ago
0
Added tutorial for using tensorboard dev.
#87
Atharva-Peshkar
closed
2 years ago
0
Bugfix: equated tile_ratio of im_train.json and mito_train.json
#86
jasonkena
closed
2 years ago
0
Made device tensor accessable as host Numpy array in utils/monitor.py
#85
ajbrookhouse
closed
2 years ago
0
Lots of changes
#84
Atom-101
closed
2 years ago
0
Added the resolution parameter in CREMI eval
#83
karan-uppal3
closed
3 years ago
0
Unsupervised or Semi-supervised learning
#82
liyun-lu
closed
1 year ago
2
Cremi Distance function
#81
geekswaroop
closed
3 years ago
0
blurpool modules added
#80
geekswaroop
closed
3 years ago
0
Blurpool modules added
#79
geekswaroop
closed
3 years ago
0
fixed config param name typo
#78
karan-uppal3
closed
3 years ago
0
Fixed font-weight for code block
#77
Fan0000
closed
3 years ago
0
make dev and master consistent
#76
zudi-lin
closed
3 years ago
0
Fixed version board
#75
Fan0000
closed
3 years ago
0
add long-range aff
#74
celinezou
closed
3 years ago
0
New Theme for Docs
#73
geekswaroop
closed
3 years ago
0
Model Information Rendering
#72
geekswaroop
closed
3 years ago
0
Added Efficientnet backbone from FFN
#71
Atom-101
closed
3 years ago
0
add 2d/3d lpf and aaa modules
#70
rainancoffee
closed
2 years ago
0
Fixed relative position embeddings for BotNet
#69
Atom-101
closed
3 years ago
0
Add 3D BotNet backbone
#68
Atom-101
closed
3 years ago
0
Data augmentation documentation link is not working.
#67
atul-77
closed
3 years ago
1
Config Unet Output directory fix
#66
geekswaroop
closed
3 years ago
0
Markdown Conversion for Tensorboard rendering.
#65
geekswaroop
closed
3 years ago
0
Scutoid_BC config
#64
Shray64
opened
3 years ago
0
How to merge MitoEM output files?
#63
Chenliang-Gu
closed
3 years ago
22
Load 3-channel label images in TIFF
#62
Michaelsqj
closed
3 years ago
0
Support valid mask option
#61
zudi-lin
closed
3 years ago
0
Data loading bug for single-channel label
#60
Limingxing00
closed
3 years ago
2
GPU underutilization
#59
Limingxing00
closed
3 years ago
1
the sample of 'im_train.json' in the yaml
#58
Limingxing00
closed
3 years ago
1
GPU related error when using CPU only (GPUutil related)
#57
ygCoconut
closed
3 years ago
1
inference for multiple input volumes: better to load the volume when needed
#56
donglaiw
closed
3 years ago
1
test_augmentor does not support 2D models
#55
donglaiw
closed
3 years ago
1
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