3dem relion issues - Githubissues

3dem / relion

Image-processing software for cryo-electron microscopy

https://relion.readthedocs.io/en/latest/

GNU General Public License v2.0

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issues

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Fix motioncor2 1.6 parsing

#1205 harryswift01 closed 12 hours ago
1
relion 4.0 GUI error in display 2D classification results

#1204 jxzhang24 closed 4 days ago
4
Bugs found in `int splitString(const std::string& input, const std::string& delimiter, ...)` in src/strings.cpp

#1203 Arpan3323 closed 1 day ago
11
Removed unused `void removeQuotes(char **_str)`

#1202 Arpan3323 closed 1 week ago
3
fixes UB in `void removeQuotes(char **_str)` implemented in src/strings.cpp

#1201 Arpan3323 closed 1 week ago
0
Bug found `void removeQuotes(char **_str)` in src/strings.cpp

#1200 Arpan3323 closed 1 week ago
2
relion ver5.0 install failed

#1199 gaorongchao opened 1 week ago
0
RELION race condition when opening GUI

#1198 clil16 opened 1 week ago
10
latest environment.yml leads to torch/numpy incompatibility

#1197 huwjenkins closed 2 weeks ago
2
Relion 5.0 -beta 3 Import tilt series

#1196 zzha25 closed 3 weeks ago
0
relion 4 helical reconstruction worse than 3.0.8

#1195 zhenwuliaoa opened 4 weeks ago
1
relion 5 pick tomograms: RuntimeError: no validator found for <class 'numpy.ndarray'>, see `arbitrary_types_allowed` in Config

#1194 RichStone99 opened 1 month ago
7
fix: Correct dyadicProduct method in Tensor2x2 class

#1193 eugenejyuan closed 1 month ago
3
Build and test for Linux/ARM64

#1192 odidev closed 1 month ago
2
unexpectedly small, yet non-zero sigma2 value

#1191 DrJesseHansen opened 1 month ago
1
how to skip-rotate in autorefine jobs

#1190 XSAWxsaw opened 1 month ago
0
"prior on psi is zero!" Error During 3D Initial Reference

#1189 Poko18 opened 1 month ago
0
Questions about importing tomo data with dose from mdoc file.

#1188 frozenfas opened 1 month ago
0
No imported tomograms

#1187 jjdjesus opened 1 month ago
1
Continue Reconstruct Tomograms denoising

#1186 FlorianBeckOle opened 1 month ago
0
Add average of power spectra for helical samples.

#1185 estrozi opened 1 month ago
0
there may be a mistake

#1184 fengxiaoshuai opened 1 month ago
0
incorrect reporting of CTFFIND4 vs CTFFIND3

#1183 huwjenkins closed 2 months ago
3
Model-Angelo: CUDA-capable device is/are busy or unavailable

#1182 AssmannG closed 2 months ago
1
Segmentation fault: address not mapped to object at address 0x80

#1181 DrJesseHansen opened 2 months ago
1
Miniforge installation for multiple user environment

#1180 robertthomasbyrne closed 2 months ago
2
unexpectedly small, yet non-zero sigma2 value when using --always_cc

#1179 Phaips opened 2 months ago
3
Conda "defaults" channel should be removed from environment.yml

#1178 jjv5 closed 2 months ago
3
semop lock error during 3D classification

#1177 DrJesseHansen opened 3 months ago
8
ERROR: tomogramTable for Position_44 does not contain a rlnTomoMicrographNameEven label

#1176 xingxingjiukunkun closed 3 months ago
1
AreTomo Relion5.0 Wrapper fails

#1175 AssmannG opened 3 months ago
2
relion_run_motioncorr --use_own --only_do_unfinished runs on all files (not just unfinished)

#1174 davidheisenberg closed 3 months ago
12
Wrong reconstruction using Reconstruct tomograms (Discrepancy with AreTomo)

#1173 navya19j opened 3 months ago
0
relion_particle_subtract resets rlnGroupNumber in (optional) --data star file but uses rlnGroupScaleCorrection from optimiser star.

#1172 huwjenkins opened 3 months ago
2
Relion Job struck at - Relion MPI Setup - for multinode jobs

#1171 iam-mg-Harish closed 3 months ago
2
In 3D classification, iteration 1 densities are scaled by normcorrection

#1170 thurberk opened 3 months ago
0
RELION tomogram reconstruction fails (or produces weird contrast) when carbon is in images

#1169 DrJesseHansen opened 3 months ago
1
AreTomo alignment and tomogram reconstruction faulty

#1168 lmcarreira opened 3 months ago
2
Relion5 Ctf estimation： BUG: MDin should contain a rlnMicrographPreExposure label

#1167 kexinliu0001 opened 4 months ago
6
Relion tomo segmentation fault in Refine3D

#1166 dacolombo opened 4 months ago
1
Import successfull but resulting star file contains only single movie for all tiit angles

#1165 jamstujam opened 4 months ago
3
cannot import data with symbolic links

#1164 DrJesseHansen opened 4 months ago
1
Error in running blush regularisation in 3D classification

#1163 ZengweiKOU opened 4 months ago
1
corrupted size vs. prev_size

#1162 lyw8120 opened 4 months ago
0
Improve method finding CUDA libraries

#1161 green-br opened 4 months ago
2
Feature request: Color jobs in the GUI

#1160 DavidAFlesher opened 4 months ago
1
BUG in RELION 5: Denoise fails with an assert command

#1159 Amy1809 closed 4 months ago
4
Relion 5 fails to reconstruct tomograms by asking for _rlnTomoMicrographNameEven label

#1158 Amy1809 closed 4 months ago
10
Import Problem: no such option: -optics-group-name

#1157 Amy1809 closed 4 months ago
0
Align tilt-series additional arguments

#1156 FlorianBeckOle opened 4 months ago
4