4Quant / ImgLib2-Notebooks

Scala Notebooks showing off ImgLib2
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ImgLib2-Notebooks

Scala Notebooks showing off ImgLib2.

Setup

The notebooks are in the format of IPython Notebooks and were created using the Jupyter Scala Implementation. They should work with other (IScala, Scala Notebook), but probably require adaptions for loading repositories.

ImgLib2 Demo

The notebook goes through the using ops demo in a Notebook

Creating an Op

A demo for creating ops

Zoom Interpolate

A demo for ImgLib2 and its views and specifically the ability to interpolate with a number of different algorithms.

Bokeh Demos

The Bokeh Demos show creating simple plots (like histograms) in the notebook using bokehjs (bokeh-scala).