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It would be great to add BART to the list of models available via numpyro: https://github.com/pymc-devs/pymc3/pull/4183
Happy to take a stab at it given some time.
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Great programme, really user friendly.
I would like to ask for/suggest the following adding:
1) reverse binomial regression
2) BARP (Bayesian additive regression trees (BART) when combined with po…
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I really enjoyed the various chapters, writing style, and code examples. Any thoughts on doing a chapter on Bayesian Additive Regression Trees and their use as a method in causal inference?
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Hi Jingyu:
From this program, all posterior samples are zero including sigma.
```
library(XBART)
f = function(x)
10*sin(pi*x[ , 1]*x[ , 2]) + 5*x[ , 3]*x[ , 4]^2 + 20*x[ , 5]
N = 100…
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Could potentially use Sobol indices: https://arxiv.org/abs/2005.13622
There is an implementation of this method here: https://bitbucket.org/mpratola/openbt/src/master/
https://bitbucket.org/mpra…
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This outlines a roadmap for basic statistical functionality that Julia needs to offer. It is heavily drawn from the table of contents for MASS.
- [ ] Data processing [DataFrames.jl](https://github.com…
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Let `G` be the "extended genotype matrix", whose rows are indexed by mutations (not sites) and samples, with `G[i,j] = 1` if the sample has inherited that mutation and `0` otherwise. This is something…
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**Submitting author:** @twj8CDC (Jacob Tiegs)
**Repository:** https://github.com/CDCgov/BART-Survival
**Branch with paper.md** (empty if default branch):
**Version:** v0.1.1
**Editor:** @mahfuz05062
…
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@kzaret, thanks for the very helpful PowerPoint slides breaking down the sources of ring-count observation error. This tracks with my understanding of the three basic error components and fleshes out …