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Hi! More of a question than a issue. Currently we are modelling our data processing workflow using common workflow language (CommonWL, CWL). We hope this gives us the most portability between the vari…
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https://www.commonwl.org
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http://www.commonwl.org/user_guide/rec-practices/ is a 404
Linked to from https://view.commonwl.org/about and https://github.com/common-workflow-library/bio-cwl-tools/blob/release/CONTRIBUTING.md a…
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- [x] move to cloud hosting ~~(with existing Rackspace free allotment that ci.commonwl.org is using?)~~
- [x] monitoring: disk space, responsiveness
- [ ] backups of user-submitted and generated dat…
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**Issue by [mr-c](https://github.com/mr-c)**
_Wednesday Sep 05, 2018 at 11:19 GMT_
_Originally opened as https://github.com/clap-rs/clap/issues/1337_
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### Bug or Feature Request Summary
Spec…
epage updated
2 years ago
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We could provide a visual rendering of process Application Package and workflows using these tools.
Directly with `cwltool`!
https://github.com/common-workflow-language/cwltool/commit/cbc33f3ee9…
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I noticed with the most recent preview that nav and many other urls are pointing to `commonwl.org` instead of `https://deploy-preview-NUM--cwl-website.netlify.app/`
Attempting a fix for it.
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This task is similar to #512 but for CWL workflows rather than Yadage workflows.
Note: see [CWL viewer](https://view.commonwl.org/) or see `cwltool --print-rdf workflow.cwl` and other "print" comma…
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- [ ] https://www.commonwl.org/v1.2.0-dev5/CommandLineTool.html#InplaceUpdateRequirement
(nb: link might change at later time with additional dev/final revisions)
Extra optimization *hint* to ht…
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`{'url': 'https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git', 'branch': '1.0.7', 'path': 'structuralvariants/cwl/subworkflows/bwa_index.cwl'}`
```
2022-12-31 16:30:23,369 ERROR [task-4] or…