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Hello,
when trying to download a non-exising (because deleted) GEO Series I get an `UnboundLocalError`.
Minimal example, that particular GSE is what raised this issue for me. According to its […
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According to https://cliff.mediacloud.org/, cliff can also geoparse German text. Assuming that I can tell the API via ?language=DE from the form params in the calls on https://cliff.mediacloud.org/.
…
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### Context
I'm trying to get my tests to pass on GitHub Actions, and I think I fixed the last bug but now GEO is down.
### Problem or idea
If GEO is down our tests fail, and they fail with a…
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Hello,
In geoparse_ dataset. py, file_ Path refers to the test data HarveyTweet2017. Because the format of the test data set is different from that of the training data set, a series of errors will…
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The following code is generating a warning for me:
```
import GEOparse
gpl = GEOparse.get_GEO('GPL17481')
```
The output is:
```
>>> import GEOparse
>>> gpl = GEOparse.get_GEO('GPL17481')
1…
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When NCBI/GEO is down, I'd expect a custom exception or some kind of graceful handling, instead you get:
```
File "/home/user/data_refinery_foreman/surveyor/geo.py", line 222, in create_experime…
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## Idea
[GEOquery](https://bioconductor.org/packages/release/bioc/html/GEOquery.html) can be used to easily load microarray-based studies from GEO.
This data can be easily incorporated into Reac…
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1. The geoparse seems to allocate building as place when China is used in a sentence
```geo.geoparse('We traveled to China')```
```
[{'country_conf': 0.68758196,
'country_predicted': 'CHN',
…
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After I downloaded Series Matrix File(s), GEOparse.get_GEO function can't work and show there isn't series.
![image](https://user-images.githubusercontent.com/51097823/87120098-3eb15e00-c2b2-11ea-97e…
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I cannot get it to return any results using the example_geoparse.py code.
Has the python3 port been completed or is this port incomplete?