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Project Lead: @SuzanneNjuki, @Brevin85, @AhmedAbdille, @George-Lugonzo
Mentor: Dr. Caleb Kibet
Welcome to OLS-7! This issue will be used to track your project and progress during the progr…
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Hi juheon,
I have read your recent published paper "Epigenetic therapy potentiates transposable element transcription to create tumor-enriched antigens in glioblastoma cells", it is really solid res…
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We have two arms of dataset curation. One is to use existing Synapse resources like manifest.csv and/or Wikis and/or tables to create dataset metadata; let's call this the internal arm. The other is t…
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Good afternoon,
I am still working on this package, and I have found a problem that I didn't see before. When applying cell_signaling() function, I get interactions between the different clusters, bu…
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Dear fans of this project,
It is with sadness and regret that I inform you that the owner and maintainer of this project, @gcla, has passed away.
A tribute to his life may be found [here](https:…
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# Glioblastoma Phase Contrast Cell Segmentation (U-Net)
Bioimage.io -- an AI model repository for deep learning.
[https://bioimage.io/?tags=deepimagej&id=deepimagej%2Funet2dglioblastomasegmentation]…
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One of bioCADDIE's key use cases is to find datasets based on the disease studied in the dataset. (N.B. not all datasets are a study a disease, but many are).
Searching Datamed for "Glioblastoma" or …
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Hi, recently I try to use your algorithm in data from https://glioblastoma.alleninstitute.org/, but bug occur, may get your help in debugging it?
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In one of the mockup data files a "Pathology" field exists, where two values exists. GBM and AIII. I assume GBM = Glioblastoma, but I can't find a pathology with the acronym AIII.
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@gwaygenomics, @allaway, and @cgreene's study was just published (two days ago):
> [**A machine learning classifier trained on cancer transcriptomes detects NF1 inactivation signal in glioblastoma*…