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This is okay with me for now to unblock the release but at some point we'll need to revisit so that the calibration information can be exposed. cc @kheal
_Originally posted by @aclum …
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This is from the great lakes LTER. Study has metagenomes, metatranscriptomes and metabolomics (JGI). Env triad has been filled out.
metabolomics record:
MSV000093272
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Metabolomics data should be included as a new dataset
- [x] Include Metabolomics as a Dataset
- [x] Include Metabolomics example dataset
- [x] Test
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Expand the MSD API and import metabolomics
-> to be discussed with Mohsen
mlist updated
1 month ago
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This project has plant associated metagenomes + JGI metabolomics.
Blocked on [GOLD-2773](https://issues.jgi.doe.gov/browse/GOLD-2773) to fill out env broad scale for the rest of the samples.
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Forest soil microbial communities from Buena Vista Peninsula, Colon Province, Panama
The goal of this study is to examine the temporal and spatial response of microbial communities and their func…
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MetabolomeXchange is hard to search
Maybe just use Chrystal's data?
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We will discuss about labelling in Metabolomics here -
1. Should we make it mandatory/optional
2. Do we have CV terms to define the different types of labelling technique?
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On the FASST task summary page, when view match is clicked, it goes to [Metabolomics USI](https://metabolomics-usi.gnps2.org/) page with the query spectrum as USI1 and the match spectrum as USI2. th…