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microbiomedata
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nmdc-server
Data portal client and server for NMDC.
https://data.microbiomedata.org
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Source MetaProteomics functional results from `functional_annotation_agg` collection for ingest and Data Portal
#1468
kheal
opened
6 hours ago
1
Update ingester to post message to Slack when ingest fails
#1467
eecavanna
opened
3 days ago
1
Post message to Slack when ingest completes successfully
#1466
eecavanna
closed
3 days ago
1
Enable gene function search on GO terms
#1465
naglepuff
opened
4 days ago
0
Data portal- support lipidome results
#1464
aclum
opened
4 days ago
1
Data portal - decide how manifest_set records should look in the UI
#1463
aclum
opened
1 week ago
1
Data portal - UI updates for GO functional search
#1462
aclum
opened
1 week ago
0
Update base url for cog
#1461
marySalvi
closed
1 week ago
0
Change base urls for kegg
#1460
marySalvi
closed
1 week ago
0
Properly ingest ko terms and COG pathways
#1459
naglepuff
closed
1 week ago
0
Data portal - expose material processing information
#1458
aclum
opened
1 week ago
1
Data portal - KEGG pathway links do not work
#1457
aclum
closed
1 week ago
1
Expose metabolomics calibration information
#1456
naglepuff
opened
1 week ago
1
Change base url and order of string parsing
#1455
marySalvi
closed
1 week ago
0
Remove has_calibration column from metab table
#1454
naglepuff
closed
1 week ago
2
data portal -dev pfam clan link out is not correct
#1453
aclum
closed
1 week ago
1
data portal prod - COG & CL terms showing up in KEGG search
#1452
aclum
closed
1 week ago
1
data portal dev - can't search by COG pathway name
#1451
aclum
closed
1 week ago
0
data portal dev missing kegg orthology and module term names
#1450
aclum
closed
1 week ago
2
metabolomics data is not showing up in data portal dev
#1449
aclum
closed
1 week ago
4
Bump `nmdc-schema` and `nmdc-submission-schema` to `11.1.0`
#1448
eecavanna
closed
1 week ago
0
Update to `nmdc-schema` version `11.1.0` and `submission-schema` version `11.1.0`
#1447
eecavanna
closed
1 week ago
0
Add delete submission button and overflow menu
#1446
JamesTessmer
opened
1 week ago
0
nginx payload size config and sample metadata loading indicator
#1445
pkalita-lbl
closed
1 week ago
0
Allow configuration of nginx `client_max_body_size` through environment
#1444
pkalita-lbl
closed
1 week ago
0
Implement API endpoint that returns TSV report about submissions that are pending review
#1443
cristina-stonepedraza
opened
1 week ago
8
767 add email field
#1442
marySalvi
closed
5 days ago
2
Refresh development docs
#1441
pkalita-lbl
opened
2 weeks ago
0
Use "soft" delete technique for submissions
#1440
pkalita-lbl
opened
2 weeks ago
0
Determine banner visibility through env vars
#1439
naglepuff
opened
2 weeks ago
0
Incorporate feedback from run-through with new developer
#1438
eecavanna
closed
2 weeks ago
3
Data portal - add identifiers to the Additional Resources section of the study page
#1437
aclum
opened
2 weeks ago
0
Add COG and PFAM facets to Data Portal
#1436
naglepuff
closed
1 week ago
2
Submission Portal - Front end implementation of tab to add external data
#1435
aclum
opened
2 weeks ago
0
Submission portal - mock up tab to add external data
#1434
aclum
opened
2 weeks ago
1
Use correct slot when querying gene aggregations
#1433
naglepuff
closed
1 week ago
1
Bump elliptic from 6.5.7 to 6.6.0 in /web
#1432
dependabot[bot]
opened
3 weeks ago
0
Update ingest of `functional_annotation_agg` for compatibility with new slot
#1431
aclum
closed
1 week ago
5
Data portal -handling of raw data
#1430
aclum
opened
4 weeks ago
0
Bump vue from 2.6.14 to 3.0.0 in /web
#1429
dependabot[bot]
opened
1 month ago
0
Fix ingest post dependency upgrade
#1428
naglepuff
closed
1 month ago
0
Set profiles_sample_rate for sentry
#1427
naglepuff
closed
1 month ago
0
Hide banner about Berkeley Schema Roll Out downtime, and reset its content
#1426
eecavanna
closed
3 weeks ago
2
Reset banner content and refrain from rendering banner
#1425
eecavanna
closed
1 month ago
2
Remove downtime banner from Data and Submission Portals
#1424
eecavanna
closed
3 weeks ago
5
bug: `annotations` column not populated by ingest
#1423
naglepuff
closed
1 month ago
1
Bump browserify-sign from 4.2.1 to 4.2.3 in /web
#1422
dependabot[bot]
opened
1 month ago
0
Remove Berkeley update banner from data and submission portals
#1421
naglepuff
closed
2 weeks ago
5
Update dependencies and enable sentry tracing
#1420
naglepuff
closed
1 month ago
0
Bump starlette from 0.17.1 to 0.40.0
#1419
dependabot[bot]
closed
1 month ago
2
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