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**Is your feature request related to a problem? Please describe.**
I was trying to prepare a system with a protein and 2 ligands (given as SDF files).
However, both ligands were named "MOL" and bo…
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Hi @AspirinCode , very impressive list!
We have a series of works that are also related to molecule editing or lead optimization
- [GraphCG](https://openreview.net/forum?id=wyU3Q4gahM), unsupervis…
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作者你好!我在使用您给出的code和checkpoint进行molecule editing,但是我使用默认参数似乎无法复现出文章里给出的结果,请问是我的哪些参数设置有问题吗?:)
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### Problem
I'm editing an Ansible project that is in a subfolder of my VS Code workspace directory
My VS Code workspace looks like this
```
├── ansible-project1
│ ├── ansible.cfg
│ ├── do…
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Improve the contribution guide with details like below. Taken from a discussion, so reword to fit as a document:
--------
So in general we try to avoid introducing some new knobs in `eos_cli_con…
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This issue contains monthly updates to the ranked list of PubMed papers for curation. The full list can be found [here](https://github.com/tanayshah2/bioregistry/blob/5560dcf284f2c0309287e0a5a551e435e…
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I'm interested in editing the matching properties of atoms/molecules in rdkit. To give an example,
Input compound: `[CH3:1][CH2:2][*:3]`
Goal: remove atom 3, and edit atom 2 so that it could matc…
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Hello everyone,
I did not found the documentation section for equations last time. Later I found it here:
MoBi Documentation/Model Building and Model Components/Working with Formulas
where I hav…
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### Enzyme, ADAR (proof-read and correct mistakes in RNA)
[**ADAR editing enzymes** are found in all multicellular animals and are conserved in sequence and protein organization. The number of ADAR g…
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@Yuri05 commented on [Fri Oct 23 2020](https://github.com/Open-Systems-Pharmacology/MoBi/issues/519)
If I export a simulation which contains proteins from PK-Sim to MoBi and recreate in MoBi, unneces…