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Hey there, wanted to ask if MEDSAM can read .nrrd files? I've tried to do so but it's not working and I'm not sure if I'm doing something wrong. Thanks!
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I guess currently it doesn't support gzip encoding..
https://github.com/scijs/nrrd-js/blob/master/nrrd.js#L156-L173
Possibly looking for something like this: https://github.com/mrdoob/three.js/blo…
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As seen with Cesar's data .. I tried a 3d static ct acquired by Dr Lalon'es group:
spatial mismatch of generated tfm/tiffs:
 would change shape seemingly randomly. I am unsure about the cause of thi…
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This is a follow up feature request from the forum discussion: https://discourse.slicer.org/t/possible-new-slicer-extension-dicomtonrrdbatchprocessing/33284/2
Batch process a DICOM directory of pat…
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Hi,
Sorry that I posted AutoTract-related issue into the dtiplayground forum, but hopefully there might be someone who can help me with the problem.
When I am running AutoTract, the final result…
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### code
import numpy as np
from cloudvolume import CloudVolume
from cloudvolume.lib import Bbox
import nrrd
print(dir(nrrd))
nrrd_…
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Really happy that v2 introduced NRRD support! It would be helpful to allow labels to be named with `.seg.nrrd` extension. Currently, they have to have `.nrrd` extension, or they won't be detected by n…
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compare http://teem.sourceforge.net/nrrd/format.html
https://pypi.org/project/pynrrd/