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While working on test data, I found that when `fcqs` is run on the real data from the Dropbox, it results in complex eigenvalues in `rigpower`, resulting in an error in `eval`.
This is the code I r…
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Create a standalone page for phenotypic data, with the intent to describe the experiment and provide the non-omic data.
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BrAPI manage phenotypic data well on the single observation level (e.g. single measurements on one plot). In the breeding process, be means of a statistical analysis, most often a ANOVA (Analysis of v…
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I am a researcher in plant genetics, currently endeavoring to understand the correlation between specific loci and phenotypic traits in plants. In my research, I have collected data on a series of loc…
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### Description
With the introduction of support for session-level data, there are some restrictions and quirks concerning how participant & session IDs are treated by Neurobagel, which are not wel…
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Is there any way to delete these stocks outside of https://github.com/solgenomics/sgn/blob/master/bin/delete_stocks.pl ? I assume if I delete plants any phenotypic data or tissue ids associated with t…
ch728 updated
1 month ago
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┆Issue is synchronized with this [Jira Task](https://ucsc-cgl.atlassian.net/browse/ANVIL-298)
┆Issue Type: Task
┆containerName: AnVIL
┆Issue Number: ANVIL-298
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Need to look whether it's possible to automatically download this data from S3 and plug it into afqi analysis.
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**Resource 1:** Mouse expression data (from MGI, the international database resource for the laboratory mouse) - Gene Expression Database (GXD) Project : GXD integrates different types of gene expre…
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(Sprint 1)
Goal:
1. Structure the phenotypic excel data into a Pandas dataframe
2. Calculate additional features from the test results (SCARED test to calculate anxiety score)