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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Vitek-Lab/MSstatsBioNet
Confirm the following by …
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Hi,
Could the protein abundance values shown in the ‘Results’ tab for DDA (Data Dependent Analysis) proteomics baseline experiments include **ppb** (parts per billion) as the unit displayed next to…
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Hello,
I am currently conducting single-cell proteomics experiments because our sample signals are much weaker compared to conventional DIA. I was wondering if DIA-NN has a similar way to adjust si…
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Defect Description :
In the Overview page of An Overview of Virtual Proteomics Laboratory experiment , when we click on the Back to Experiments link , it is redirecting to the Sensors Modeling and Sim…
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Is there any reason to restrict the scope of this project to "neuroscience" ? Couldn't we think about life science in general?
Especially when one consider that neuroscientists sometimes also do me…
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First copy [this file](https://github.com/PNNL-CompBio/p3/blob/main/functional/calculate-functional-enrichment.Rmd) to this repo. Then we can run the three tests on the protein data (syn25706561) and …
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# Abstract
Cytoscape is an open-source software to visualize and analyze biological networks. Developers can add new features to Cytoscape by developing their own Java-based apps by utilizing the C…
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My personal favorite feature of MS-GF+ is that the program allows one to use the results from a search to re-train the scoring parameters for your specific type of peptides. This feature is especiall…
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Hi, I've tried to color the points by a categorical variable (another column in my TSV file) but only got a greyish 3D point cloud. Tested on Firefox 56.0/Chrome 61.0.3163.100, OS X (v10.11.2). Please…
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I think this record
http://bioregistry.io/registry/biosample
is a bit confusing w.r.t whether it is for EBI biosample IDs or INSDC biosample IDs
Of course, for samples, EBI/ DDBJ/NCBI all use t…