-
Stain normalization in MONAI consists of two components stain extraction and stain normalization. Right now, they are specific to Hematoxylin and Eosin stains but both of these components can be gener…
-
Stain이란, 의사들이 특정 장기의 조직을 볼 때, 시각적 도움을 얻기 위해서 염색하는 것을 의미합니다.
가장 많이 사용되는 Stain 중 하나는 H&E.
Hematoxylin은 세포의 핵, 핵 내의 염색질, 핵막, Eosin은 대조염색제로서, H이 염색하지 않는 것들을 붉은색으로 염색함.
Stain을 진행하는 과정에 있어서, 국가별로 기관별로 …
-
Hi, thanks for your great work. I wonder if we need to correct the batch effects of these spatial transcriptomic data or not. Thanks a lot!
-
@neerajkumarvaid
Hi, I would like to do the experiments using your code.
But I can't find the target image for stain normalization(Vahadane's method).
Could you please share the target image…
-
Adaptive instance normalization should remove some of the generator artifacts (like random color stains)
-
This feature request was mentioned in issue https://github.com/EIDOSLAB/torchstain/issues/3. However, I believe it would be better to track it in a separate issue.
The idea is basically to introduc…
-
Hi!
I've recently downloaded the most recent version of the qupath cellpose extension and run into an issue I am not able to solve. When I try to run the "detection script template" or "detect nuclei…
-
Hi all,
First of all, great work with this package! It is amazing how fast it can work and produce stain normalization, great work!
A bit of background: I have been working on H&E stain images w…
-
## Report needed documentation
**Report needed documentation**
It would be nice to add Jupyter notebooks that show how to use newly added features.
E.g.,
- [stain normalization](https://git…
-
**Describe the bug**
When using CellViT to segment some WSIs under 20x magnification scale, the result showed in QuPath is incorrect. However, when under 40x magnification scale, they are correct. Bu…