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Hi,
To have a depth understanding, I wanted to set the resolution high for louvain clustering, but now I cannot merge subclusters. When I try to rename the categories with same cluster name, it giv…
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https://mp.weixin.qq.com/s/PioxnvLwUW7gUsxLj7PU3Q
ixxmu updated
9 months ago
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Hello,
I am trying to subset cells that are expressing any pairs of genetic markers that are from two distinct macro-types of cells.
I have for different cellular macro-types a list of correspon…
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https://mp.weixin.qq.com/s/n1XigM90n1EtJBZrlOOo-A
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https://mp.weixin.qq.com/s/XVndy1l2azhMsRDUScpoXw
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Hello @sqjin,
Thanks for such an amazing tool and for the detailed tutorial!
I have managed to run the entire pipeline on particular data I loaded from Seurat, but only in very specific condit…
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So, in the wiki you say
![image](https://user-images.githubusercontent.com/84338703/194301074-2025bc7c-e6a1-44d2-bbef-f044d4de57eb.png)
However, if I do not prepare the quantiles, a specifity_quan…
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Hi,
I have two datasets of tumor tissue. Their cells are made up of similar components, but also different components.The similar ones are non-tumor cells, and the different components are tumor cell…
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**Describe the bug**
I have an error while trying to update the project.
****To Reproduce****
In UmitToolbox main - Astrocytes-v1.5.0
Click on Utilities - Project - Update Project - Full u…
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Jai created this figure:
![image](https://user-images.githubusercontent.com/33265555/125106074-1f245f80-e0d7-11eb-959c-1627df52fd62.png)
It shows that at the leaves of the network, enrichments a…