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Hi,
I would have a question regarding the use of tax_glom and rarefy_even_depth in phyloseq.
For my study, after having merged the tree, the metadata, the OTU table and taxonomy, I first used tax_…
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Trying to compute a weighted UniFrac distance using `beta_diversity` and the 97% GreenGenes tree, I get the following error:
`ValueError: All non-root nodes in ``tree`` must have a branch length.`
…
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Investigating antibiotics effects
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Hi Jennifer:
I am trying to figure out if Bracken is appropriate for my analysis and haven't been able to find out for sure in the documentation or other forums.
I sequenced total mRNA from 40…
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Dear @kpmainali,
I was very excited to read your recent paper https://www.science.org/doi/full/10.1126/sciadv.abj9204
and the R package works like a dream - nice work on the CI's.
I'm sti…
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when using kolors ...
!!! Exception during processing !!! local variable 'app_face' referenced before assignment
Traceback (most recent call last):
File "D:\ComfyUI-aki-v1.2\execution.py", li…
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`let betaDivTable = new PdfTable(doc, {
// bottomMargin: 30
});
betaDivTable
// add some plugins (here, a 'fit-to-width' for a column)
…
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Hi! First, thank you for creating this package, it is really helpful. I was wondering if I could ask for your help with the following. I just rarefied my data using the function mirl, and now I would …
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this will likely be a huge amount of work - we need to figure out how important it is
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## code refactoring
- [ ] `get_mob_stats` --> 316776f introduced `calc_comm_div` which accomplishes some of these (`get_mob_stats` is obsolete`)
- [x] output needs to be in as a `tibble` or `dat…