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Hello, Thank you for sharing your bias correction programs
I am following the example from https://github.com/pankajkarman/bias_correction/blob/master/example.ipynb.
However, when I get some error…
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Hi guys,
I've noticed anecdotally (though [I've heard this from others as well](https://layerfmri.com/2017/12/21/bias-field-correction/)) that for better FreeSurfer surface reconstruction, the choi…
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Hello
I have three questions pertaining to the VPhaser output
1) How do I interpret the output below ??
Pos Var Cons Strd_bias_pval Type Var_perc SNP_or_LP_Profile
1425…
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Im trying to apply N4BiasFieldCorrection on multiple image (more than 100) i just put this code on for loop how with different methods, however i got the following errors. It run on one by one images …
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**In my role as....**
An external tool user
**I need to be able to...**
Use a single tool (index calculation, bias correction, etc. )
**in order to...**
Apply it to an independent dataset
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1. Our typical fetal brain MRI raw data are T2W images (haste sequence, SIEMENSE 3T scanner) have 1mm in-plane resolution and 3mm thickness. We acquire 9 of these stacks with 3 repetitions for transve…
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It looks like the energy communicated by gromacs does not include long tail corrections. Maybe this should be fixed if possible?
See [mailing list](https://groups.google.com/d/msgid/plumed-users/CA…
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I tried with Prodigy optimizer, and it is exactly as you wrote - reaaallly slow convergence. I trained the model for 120 epochs and I could easily train another 60 epochs. I want to giva a try with Ad…
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Disclaimer: very new at all this. I'm coming from the perspective of an inference user, when on a good model using a nice prompt and sampler, there tends to be a number of steps past which, it will al…
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@pvelissariou1 @ps2epsi @gseroka
All,
Make a clean clone of the code. Please review this issue:
Known issues:
- some times git pull make pynmd not working properly. In those case you ma…