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Hi, I tried following your code to create patches by using `bash create_patches.sh`. However, there are two missing slides (normal_027 and normal_045), and as a result, I could only get 397 instead of…
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### Operating system
ubuntu 20.04
### Platform
x86_64 x86_64 x86_64 GNU/Linux
### OpenSlide Python version
1.3.1
### OpenSlide version
4.0.0
### Slide format
TIFF
### Issue details
I work…
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Hi,
Thank you for your work. It's very amazing!
Is it possible for you to provide me with the Extracted patch features using SSL ViT-S/16 on camelyon16? I would appreciate it if you could provid…
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hello, i am using tiffslide with the camelyon16 dataset. i realized that tiffslide cannot read the mpp of these images, whereas openslide-python can. i have included info below on how to reproduce thi…
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I tried your trained model `camelyon_40x_cv_CLAM_100_s1` on the CAMELYON16+17 dataset. The model could perform very well on the CAMELYON16 subset (AUC: 0.96~0.97) but after adding CAMELYON17, the AUC …
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After changes introduced in https://github.com/DIAGNijmegen/pathology-whole-slide-data/pull/56 by @siemdejong that fixed https://github.com/DIAGNijmegen/pathology-whole-slide-data/issues/55, new error…
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Hi there, thanks a lot for the great work!
I am adapting your algorithm on a mixture of TCGA-GBM and some private data. Would you please give me some suggestions about hyperparameter choosing? Sinc…
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Hi,
Great repo and paper - I really enjoyed reading it!
You have calculated some patch-level localisation metrics in the paper, and I would like to do the same on an algorithm I am working on. C…
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Hi
Can you guys or someone explain how the prediction for instances which leads to FROC is achieved? (It's non existent in the repo and totally not clear in the paper)
Because I made my own patches …
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Hi! Thanks for your great work!
May I ask you a question about models' parameters for different feature extractors?
In the paper, different feature extractors are used to extract patches' features. …