-
```
1. -D parameters
2. PORTAL_HOME/portal.properties
```
Get rid of baked in portal.properties
Blocked by: https://github.com/cBioPortal/cbioportal/issues/6109
See: https://github.com/cBi…
inodb updated
3 years ago
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I suppose the get request : https://www.cbioportal.org/webservice.do?cmd=getCancerStudies is not working.
Getting this error:
![image](https://github.com/iVis-at-Bilkent/pathway-mapper/assets/101…
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In certain cases data bins are not correctly placed within the bar chart:
Current placement:
![Screen Shot 2021-02-25 at 9 17 58 AM](https://user-images.githubusercontent.com/1334004/109166345-9c6…
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The mutation mapper queries Genome Nexus for variants using location information. The data, with gene names, are sent back to client, which then uses gene names to query the cbioportal for gene data…
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Related to cBioPortal/cbioportal#6759, we should also add a chart for SV data, such that you can select a gene and get a chart of all the fusion partner genes for that gene
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The column header is probably too specific. We should show whichever expression data we can (according to some order of precedence) and name the column accordingly.
https://github.com/cBioPortal/c…
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We have several GitHub Action workflows to build artifacts from this repository. For unknown reasons, they only work with
```yml
runs-on: ubuntu-
```
On both macOS and windows, an error occurs…
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- Put barchart in the top of the tooltip
- Significant Mutational Signatures -> Mutational Signatures? Or just list significant ones?
inodb updated
6 months ago
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Change deployment to catalina ROOT so that the final URL reads https://servername.com instead of https://servername.com/cbioportal.
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There should never be mutations that are in both `data_mutations.txt` and `data_mutations_uncalled.txt`. The uncalled profile contains all mutations that weren't called, so it is mutually exclusive wi…
inodb updated
6 months ago