-
This issue has been reported in forum thread https://forum.image.sc/t/bioformats-wont-read-czi-linescans-properly/32428/19 and follows on from a fix in 6.4.0 https://github.com/ome/bioformats/pull/349…
-
Hi guys,
Melissa Linkert pointed me towards you since she thinke this issue might be relateted to:
ttps://github.com/CellProfiler/python-bioformats/issues/23
Is this the case?
Sebi
Here is my ori…
-
Currently, I have a CZI file that has multiple scenes (21) and would like to extract and export them as different images and a file sorting system that I have coded will sort the images. I have notice…
-
Author: @rinkug
EB member: @curfman
A multi-million dollar program to support open source software. Should be added to "Funding Sources and Programs" category.
-
Seems that the channel indexes are 0-based and that the resave plugin is 1-based
`java.lang.RuntimeException: File 'BOB.czi' has only channels [0 ... 1], but you want to open channel 2. Stopping.
…
lacan updated
8 years ago
-
First, thanks for working on this critical package. I understand and appreciate how complex opening proprietary binary file formats can be. I followed the package from aicsimageio to its new home at b…
-
Sheets with tissue-specific cell count information from CellxGene and HCA portals to be added starting with kidney.
-
### Feature Description
Put physical T units on same level as physical pixel dimensions.
### Use Case
For time series data we need to be able to read the time interval between captures.
##…
-
Hi all.
I am trying to read in czi files, but kept having problems by this error message:
```
Error in detector_gain[i]
-
**Describe the bug**
I've noticed a linear increase in memory usage when processing multiple czi files in headless mode, with memory usage increasing with every image being processed. The memory does…
ovesh updated
2 years ago