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I was playing around with the `crispr` module and came across a weird error where the cut coordinates of a `cas9` object were way larger than the target sequence.
```
from pydna.dseqrecord import …
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```
module MWE
import LogDensityProblems
using Turing: @model, MvNormal, LogDensityFunction
using Enzyme
@model function satellite_model_matrix(::Type{TV}=Matrix{Float64}) where {TV}
@…
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https://juliadiff.org/ForwardDiff.jl/v0.7/user/api.html#Jacobians-of-f(x::AbstractArray)::AbstractArray-1
An API like:
`ForwardDiff.jacobian(f!, y::AbstractArray, x::AbstractArray, cfg::JacobianCo…
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The profiling dev tools in chrome stopped working for me. Probably, a good incentive to update react and reduce the technical debt a bit.
- [React 18 Upgrade Guide](https://react.dev/blog/2022/03/0…
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Just spend 6 hours trying to figure out why all my react jest tests broke. an old package called enzyme uses this. and it's not pegged to "1.0.0-rc.12", all the jests test broke with the error
Tes…
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I used multiple enzyme digestion in my experiment (Trypsin + lys-c). Which enzyme should I pick for in silico FASTA protease digestion?
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```julia
using Enzyme, Lux, SimpleChains, Random
model = Chain(Dense(10, 10, tanh), Dense(10, 10, tanh))
scmodel = ToSimpleChainsAdaptor(static((10,)))(model)
x = rand(Float32, 10, 2)
ps, st …
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On the 2024-08-26 ontology call we discussed how we'd like to represent gene products that function as molecular sensors.
Here are some of the relevant points we touched on:
1. Gene products are…
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Update the unit testing to use `react testing library` instead of `enzyme` in the Authentication related files.
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Hi, thank you for the great package and documentation. I would like to simulate a Type2s-like assembly where the acceptor and the inserts are digested by different enzymes. In other words, the accepto…