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Hello!
I am working through the tutorial and I have my own RNA-seq data that I would like to process with linseed. Does the LinseedObject function require data be formatted exactly as "GSE19830_ser…
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Hi, I am trying to build my own Sourmash LCA database based on NCBI, SILVA, or Greengenes databases for taxonomic classification for my k-mer hash dataset (e.g. 7-mer) computed from 16S rRNA gene sequ…
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http://doi.org/10.1101/085118 (http://biorxiv.org/content/early/2016/11/02/085118)
> Morphological profiling aims to create signatures of genes, chemicals and diseases from microscopy images. Curre…
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Hi,
I have same sample for 7 different time points and each with replicates. I would like to find out gene clusters for each time point that define that time point (gene signatures).
Here is the tab…
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### Description of feature
It would be useful to add [BioQC](https://github.com/Accio/BioQC) as an analysis module and the output to the MultiQC report.
*(Disclaimer: I'm a coauthor on the [BioQC…
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In GitLab by @fbastian on Apr 19, 2016, 16:06
Rough figure of workflow for multi-species analyses in bgee-core:
[multispe_workflow.pdf](https://gitlab.isb-sib.ch/Bgee/bgee_apps/uploads/cee5900a69…
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Hi,
Thanks for your work.
I queried some up and down-regulated genes on sigcom web, there were some results from different data source, and here are two of them:
![image](https://user-images.github…
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Hi,
The samples sequenced in more depth will have more counts. So, are the estimated reference expression signatures generated by mod.export_posterior() normalized or scaled or just the inferred coun…
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It should have three sections:
Upload background
Upload a new resource
Upload a new library of signatures