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In my use I add a FASTA asset (a secondary one) like:
```
refgenie build homo_sapiens--GRCh38/fasta:cdna_ensembl95 --files fasta=Homo_sapiens.GRCh38.cdna.all.95.fa.gz
```
That works:
```
>…
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prod: https://www.fuer-gesunde-familien.ch/index.php?id=28
dev: https://dev.fuer-gesunde-familien.ch/befreiung-homo-netzwerke
**Prod**
2019-07-30 09:57:30,683 - p…
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## Describe the issue
Hi, I am using the rest api end point `overlap/id/:id` to retrieve features (gene -> transcript -> exon -> cds) that overlap with a transcript region. I cannot find version numb…
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Hi!
I was trying to run the pipeline using a SMB-mounted directory in a network cluster, but I got an error at the beginning regarding symbolic links:
"Command error:
ln: failed to create sym…
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Hello!
https://github.com/snakemake-workflows/cyrcular-calling/blob/ccd556ac3e007e1f5ffc039a9c2550b067c27dc3/workflow/rules/ref.smk#L74
The number between `regulatory_features` and `.gff.gz ` in…
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I think I worked out the problem with the ID mapper.
It looks like the ID mapper currently works like this:
From ID ---> Internal anchor ID (UniProtKB Canonical Ac) ---> To ID: Canonical protein …
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Hello, sir.
I don't quite understand why the label does not contain H.
Can you help me QAQ
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I tried to build a reference genome. I got the following error:
> The following mandatory metadata missing from gtf: transcript_id, gene_id
> In addition: Warning message:
> In .local(con, format…
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This is for an issue raised by Otero Calvi. See the cclib-devel post (https://sourceforge.net/p/cclib/mailman/message/36026056/) for details.