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I would like to add data cleaning techniques. All the operations I would explain with the help of a basic dataset like Titanic.
1. Handling Numerical missing values
i. Dropping the rows…
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Getting an error in plot_signatures function:
Error in quantile.default(late_early, 0.05) :
missing values and NaN's not allowed if 'na.rm' is FALSE
Looking in more detail at the function, it…
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Hi,
I'm looking for a solution of a fairly straightforward problem: I have scores for all heterozygous SNPs in a pool of normals describing how the allelic fraction (not population allele frequency…
lima1 updated
4 years ago
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One of the reason that the iterative methodology was not utilizaed was due to the fact of extreme sparsity and also the fact that the convergence property is not well known.
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Model correlation among covariates to better estimate missing values.
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Hi
I'm trying to do some imputation checks by masking the genotype data and it worked well with the original file but always get errors when I use the file that I added random 9(missing value) into t…
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Hello @WansonChoi
I am facing error in the last step of CookHLA pipeline, I used my data (chr6 29mb-34mb) data with the reference data from 1000 genome reference panel however it failed due to the f…
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Hello, I was wondering if scVI-3D can be used with 10kb scHi-C data for imputation?
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Hello,
thank you for making this great package!
I have a dataset with missing values so I am using the mediations() and amelidiate() functions. At the same time, I would also like to test whether …
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I'm trying to use weight and income to impute age and gender. But when I'm doing the linear regression of age on weight and income, the result was not significant at all. Can I just go on with it or t…