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Dear OpenMS Team,
I am using pyopenms and I have problem reading the imzml file by IndexedMzMLFileLoader()
I get False when I load the file, and if I try reading the Spectrum for example I get ru…
nh012 updated
2 years ago
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Hi, there,
As I was loading the Imzml data,
I found this:
```
mz
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Composite datatypes are getting more important as more communities trying to use Galaxy. We have discovered that given the following code the tests with planemo are not running as expected.
```
…
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Reprocess datasets provided by Bishoy to test ML scoring model
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Hello,
I am trying to use rMSIproc with imzML files.
The process runs and load the data as follows:
Processing execution 1 of 1
Loading Image...
No ramdisk directory, it will be created
…
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Hi,
I am try to use the sample data provided but after loading your peak matrix (pks
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Hi,
Is there an export function built in to the SPUTNIK package or does one have to code it themselves?
Thanks!
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I used the following preprocessing params:
```
fac = 15000
nl = 2
wl = 100
peakmzs = sp.spectra_peak_mzs_adaptative_noiselevel(spectra, factor=fac, noise_level=nl, wlen=wl) # no…
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I am trying to read an imzML file using this fuction:
def getspectrum(self, index):
mz_bytes, intensity_bytes = self.get_spectrum_as_string(index)
mz_array = np.frombuffer(mz_byte…
aryre updated
2 years ago
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### Basic information
* My operating system: Windows 10
* My MZmine version: 3.0.21-beta
### What happened
I am a beginner to this but I cannot figure out how to import imaging data. Any hel…