-
Thank you for sharing your research work. I have a question related to the supervised fine-tuning step, which, according to the paper, is used to initialize the `base` model before running SimPO. Whil…
-
# Description
**new user requests**: please verify that the user does not already exist in dsva.slack.com (it may be the account exists, but is not in a particular channel)
Please add tyler.todd@tho…
-
Write detailed breakdown of documentation tasks for data API.
Possible duplicate of #56
-
Hi, thanks again for this excellent repo. The model trains fine for me on a multi-gpu system using deepspeed stage 2 with or without offload, and I see the expected training/validation time reduction…
-
## Feature request
### Tool(s) or class(es) involved
mutect2.wdl and related scripts
### Description
It would be useful to have multi-sample calling support (#5560) in M2 WDL.
-
The [documentation](https://gatk.broadinstitute.org/hc/en-us/articles/360037594571-FastaAlternateReferenceMaker) makes no mention of multi-sample VCFs. Please explain whether it works and what the out…
-
GenomicsDBImport currently doesn't support multi-sample input vcfs. We've had a number of usesr request the ability to import precombined multi-sample vcfs.
People may have old call-sets which t…
-
### Describe the Bug
see log below
### Steps to reproduce
executed the exe file
### Relevant log output
```shell
{"level":"fatal","time":"2024-08-22T09:05:22.567+0100","message":"Error cloning r…
-
Issues found:
* Number of frames per trigger needs to be the number per each rotation rather than full collection
* GDA needed to pass in GPU and multipin things to GUP
* Plan needed to be a MsgGen…
-
Thanks to your work, the velocyto is very good. And I noticed that there is a parameter '-s' for metadatatable, but the .csv file could only has the information about the samples and sample ids. How c…