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Thank you for developing smetana!
I just have a general question. I'm currently building models with carveme by using the default command (`carve genome.faa`) without
specifying any media via `--gap…
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Here describes why are you proposing this to do , in which context and which literature are you using for this.
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For the classical ANOVA's, can we have an omnibus test please? For why we need it see
Cramer, A. O. J., van Ravenzwaaij, D., Matzke, D., Steingroever, H., Wetzels, R., Grasman, R. P. P. P., Waldor…
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Currently to define `force`/`forces` and `potential_energy` for in-built and custom interactions we have:
- `force(inter::MyPairwiseInter, vec_ij, coord_i, coord_j, atom_i, atom_j, boundary, special=…
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Introduction
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DeepChem's support for protein-based deep learning is still pretty early-stage. In this issue I propose a framework for adding support to DeepChem for doing more systemat…
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```python
%matplotlib inline
from sklearn.datasets import fetch_openml
from dabl.utils import data_df_from_bunch
from dabl import plot_supervised
# wine_quality
data = fetch_openml(data_id=287)
…
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Dear All,
When I perform a single point energy evaluation with Vina and AD4 force field (on a pose generated with ADFR), I am never able to obtain a perfect match with the energy terms for the end …
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(I didn't find an issue directly for automatically creating exog)
We need automatically created exog for prediction as tools to illustrate the effect of explanatory variables.
I'm trying to do thi…
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Hi,
I am currently using MassLin2 to analyze my longitudinal microbiome dataset; however, I saw your recent paper describing LinDA and its strengths in comparison to MassLin2. Therefore, I would li…
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## Intent
Right now to perform MBAR we have to compute energies over the entire system when the only portion of the system that actually changes is the lambda. This means building the full neighbor…