-
@jpfeuffer @timo:
We have been exploring the mzTab output and detect the following issues:
- [x] all proteins are tag as `indistinguishable_proteins`. @jpfeuffer mention that some proteins sho…
-
Following the current JSON format, the tabular format (HDF, CSV, TSV...) would have four tables, one for each data level (`library`, `spectrum`, `peak` and `peak interpretation`) with the following co…
RalfG updated
4 years ago
-
We are totally conflating the terms peptide and peptidoform. From the /peptides YAML doc:
http://www.peptideatlas.org/api/proxi/v0.1/ui/#/
"The peptide entry point returns global peptidoform stati…
-
Hi,
I am trying to run deepmass but am running into the following error (here shown if running tensorflow from a virtual environment, however this also happens if running from a system install):
…
-
Trying to replace Fido with Epifany from a nighly
Version: 2.4.0-HEAD-HASH-NOTFOUND-HEAD-HASH-NOTFOUND Sep 9 2019, 13:03:04, Revision: a5903f78752457d371d499ce6b9342ff83ef88cd
When I ran the fo…
-
make advanced:
- sonar
maybe rename:
-Scoring -> scoring
Applies to this tool but others as well : **how to handle the display of subsection parameters.**
Right now, I think they are complet…
-
Hi rmillikin,
I am currently trying to run a crosslinking search on a raw file. My inexperience with MetaMorpheus limits me. I am wondering what these parameters mean and what would be reasonable n…