smith-chem-wisc MetaMorpheus issues

smith-chem-wisc / MetaMorpheus

Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities

MIT License

90 stars 45 forks source link

issues

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Added option to limit the number of identificatiosn per spectrum to the search task

#2382 nbollis closed 4 days ago
0
Asynchronous file loading for search task

#2381 nbollis opened 6 days ago
1
DIA_XIC

#2380 YulingDai opened 6 days ago
0
Meta Draw Quality of Life Updates

#2379 nbollis opened 6 days ago
1
Added some tooltips for the cross link search task view.

#2378 avcarr2 closed 4 days ago
1
Added new features to Top-Down PEP

#2377 nbollis opened 1 week ago
1
new style computation of pep q-value

#2376 trishorts opened 1 week ago
0
Only quantify peptides that clear the q-value threshold

#2375 Alexander-Sol opened 2 weeks ago
1
Pep bug fix

#2374 Alexander-Sol closed 1 week ago
1
Pep on peptides first

#2373 trishorts closed 1 week ago
1
Stop scrolling of progress bar after calculating spectral angle

#2372 nbollis closed 2 weeks ago
1
Cross Link Spectrum Match Plot Export Bug Fix

#2371 nbollis closed 3 weeks ago
1
Spectral Averaging Command Line

#2370 nbollis closed 3 weeks ago
0
Update to MzLib 1.0.549

#2369 nbollis closed 1 month ago
1
Glyco Results.txt does not have a summary at the top :(

#2368 nbollis opened 1 month ago
0
Add the comment on glyco-searching and the search summary on the result file

#2367 RayMSMS opened 1 month ago
1
Crash - Index was outside the bounds of the array - XLSearchTask

#2366 xLinkKnight opened 1 month ago
0
Added precursor intensity to PSM, peptide proteoform output file

#2365 zhuoxinshi closed 2 weeks ago
2
Enable users to limit the number of chimeric identifications per spectra

#2364 nbollis closed 1 month ago
1
Ignore

#2363 nbollis closed 1 month ago
0
add q-value to the all quantified peptides output.

#2362 trishorts opened 2 months ago
0
MetaDraw Fragmentation Reanalysis

#2361 nbollis closed 1 week ago
6
added hyperscore calculation to PEP

#2360 trishorts opened 2 months ago
1
Upgrading wixtools from a release candidate version to 5.0.0

#2359 elaboy opened 2 months ago
0
Add q-value output filter for XL Search

#2358 trishorts opened 2 months ago
0
FDR control

#2357 ShadoWyyyy opened 2 months ago
1
Invert q-value

#2355 trishorts closed 2 months ago
1
Shared pep box

#2354 Alexander-Sol closed 4 months ago
1
Shared peptides tic box for lfq

#2353 trishorts closed 4 months ago
1
Added custom protease window in GUI

#2352 zhuoxinshi opened 4 months ago
0
Glyco spectrum library search updates

#2351 trishorts closed 4 months ago
1
Update .NET version in readme

#2350 acesnik closed 4 months ago
0
use mzlib LibrarySpectrum class

#2349 trishorts closed 4 months ago
1
invert q-value take two

#2348 trishorts closed 3 months ago
0
Eliminate PsmCount from PEP calculation

#2347 trishorts closed 3 months ago
1
add to dictionary glymassdic

#2346 RayMSMS opened 4 months ago
1
Add XLMS paper to citations

#2345 acesnik closed 4 months ago
0
Update pep

#2344 trishorts closed 4 months ago
1
Pass dissociation type not autodetect to diss type collection

#2343 trishorts closed 4 months ago
1
Added console output before and after uniprot tests

#2342 Alexander-Sol closed 4 months ago
0
[Ignore Coverage] #4 - Digestion params generalization

#2341 nbollis opened 4 months ago
2
#3 -Spectral Match Generalization

#2340 nbollis closed 3 months ago
2
#2- Deconvolution Generalization

#2339 nbollis closed 4 months ago
1
Eliminate delta score option

#2338 trishorts closed 5 months ago
1
Invert qvalue calculation

#2337 trishorts closed 3 months ago
1
Add leucine to chymotrypsin cleavage motifs

#2336 trishorts closed 4 months ago
1
Specify contaminants database via command line

#2335 mgraeff closed 5 months ago
0
#1 - Update Mzlib to 1.0.547 (Omics Update)

#2334 nbollis closed 4 months ago
1
Custom mod on custom amino acid

#2333 lonelu opened 5 months ago
1
No Effect from Including spectrumLibrary.msp

#2332 yuz2011 opened 5 months ago
1