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Hi @fteufel
I realized that there are 119 proteins in my organism PfalciparumNF54 that were previously predicted to have signal peptide by Signalpv5 but are predicted to not have by Signalp6. For …
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Dear @vitkl
Thanks for developing PItools. I am first time usier of PItools and I was trying to fetch the interactions for Plasmodium from Intact and I encountered the following error:
```r
> …
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Tweets:
@egonwillighagen @cdsouthan @xanderpico @Chris_Evelo Hi gents - most OSM targets not known. Phenotypic discovery. Series 4 likely PfATP4 1/2
https://twitter.com/MatToddChem/status/61041511037…
egonw updated
9 years ago
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Hi everyone,
I’m Sarah and a second year PhD student at the Griffith Institute of Drug Discovery. My project focuses on different proteins that are interesting targets for fragment screening using …
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For instance,
https://tools.wmflabs.org/scholia/topic/Q18123741
lists basically only papers directly annotated with P921=Q18123741, which is good, but it would be good to have an option (think
htt…
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The recent [brilliant results](https://github.com/OpenSourceMalaria/Series3/issues/14#issuecomment-605044400) have identified OSM-S-106 as a potent inhibitor of PfηCA (Ki of 2.2 nM ) with useful selec…
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There are 400 SRC proteins in the IEDB `source` table that are not in ONTIE. Of these, 189 are inactive or related, so they don't appear anywhere in the protein tree. Of the remaining 211, 73 of them …
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Continuing on with review of the 'x-merization activity' terms, here are the annotations that need review for 'protein heterodimerization activity' (GO:0046982).
Reviews are organized below accordi…
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Hi Jie,
there is an RNASeq dataset where i'd like to load some associated metadata. It is the "Lee Gambian" dataset in plasmo and host.
The meta data is here:
https://www.ncbi.nlm.nih.gov/pmc/arti…
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## Sept 26, 2024
@natefoo started the process:
- Galaxy dbKeys will be set to GenBank or RefSeq IDs (`assembly version ID` column in https://brc-analytics.org/data/organisms)
- Names (in tool dropdo…