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Various LU codes are used in nttools$stxtools that should be replaced.
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It would be good to have a way to extend the localize_peaks function in order to deal with custom pipelines. Ideally, what would you think of something like localize_peaks(....extra_nodes=None, ...)
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yger updated
10 months ago
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Dear all,
could we try to put all kinds of filters out of the main modules?
For example, here within calling the gait sequence detection algorithm, the `window_length` and `polynomial_order` fo…
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Some commands crash the kernel when run in the Spyder iPython console vs the Python CLI. See https://github.com/ipython/ipython/issues/14266
ba05 updated
7 months ago
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Thank you for developing this tool. I tried to use it on my genome assemblies before and after purge haplotigs. This is an example of my commands:
#generate BAM file (I already had this BAM file an…
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When we use Savitzky Golay Filte to smooth data, we found that the result after Java processing is inconsistent with Python. Inconsistent intervals appear at the edges,so we checked the source code o…
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The JWST pipeline doesn't bother to perform any 1/f noise correction with the side pixels for subarray data even if they are manually flagged as reference pixels. We will need to come up with our own …
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Getting a persistent "divide by zero" warning that sometimes stops the extraction and sometimes doesn't
Optimally extracting 2 apertures in 1 orders (with background subtraction)...
/Users/adam/py…
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this seems to be an issue in the get_ranges() function, and only applies to combined spectra (individual SXD spectra are fine) and doesn't affect combined prism spectra
```
from pyspextool.plot.pl…
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## Description of the problem
Computing the acceleration would be very nice to have.
## Description of a solution
The first iteration should at least use the `savgol_filter` from scipy:
https://…