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I don't know if this is just me and others on mac can do this successfully, or if no one is trying this on macOS and it's just broken, but while `conda build recipes/anise_basil` and the remote circle…
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Hi,
I could not find installation instructions (from source) and list of dependencies. Is this available somewhere ? For now, I am having to figure it out based on errors that CMake gives... I don't …
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Hi,
I've been been having trouble getting Rcount-distribute to run Rcount-multireads output:
I took a bam file, and ran it through Rcount-multireads.
I then took the weighted result and tried runnin…
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Hi,
this is Hannes from SeqAn. From your benchmark file it looks like you are neither setting c++ optimization levels, nor deactivating debug:
https://github.com/walaj/SeqLib/blob/master/benchmark/M…
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As per https://github.com/dib-lab/sourmash/pull/166/files#diff-0b5baa8c66f625d5b16a6ada6c9aa998R471
Currently we only support loading from something that C++ understands (file or stdin).
Maybe easie…
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Hi,
I try to run unicycler for a hybrid assembly and when I arrive to the step "Aligning read" after the step "SPAdes assemblies", the run is stuck to 100% :
Aligning reads (2018-09-06 18:17:33…
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Hi,
I've had good results from running Translocator on a local server, and now I'm having trouble trying to run it through a WDL file on the google cloud infrastructure. With every input file I try…
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Hi,
I am using SeqAn 2.3.2. I am following sequence I/O tutorial. The steps mentioned to read records in chunks is not very much clear. For example, I have a fastq file with 100 records. I am tryin…
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`std::string` → `string`
`std::filesystem::path` → `path`