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Hi!
Thank you a lot for your tools, it's so enjoyable!
I have some problems with the new shiny app - there is an error " nrow(exons_chr)>0 is not TRUE" in place where supposed to be "splicing event…
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Hi,
I ran the following commands
`samtools sort -t CB -O BAM -o cellsorted_possorted_genome_bam.bam possorted_genome_bam.bam`
`velocyto run -b filtered_gene_bc_matrices/mm10/barcodes.tsv -m ../…
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within my data I only have 3 replicates per sample so there are 6 total samples in a comparison. I am able to generate the leafcutter_ds_effect_size.txt and leafcutter_ds_cluster_significance.txt file…
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Currently, NetBox does not support any concept of physical cable plant installations. We can connect one interface to another, but there is no way too associate that connection with information about …
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- [ ] What is the primary story your data is telling?
- [ ] What are the different options for visualizing the data, list as many as possible.
- [ ] Develop a timeline where abouts you would have a …
sr320 updated
7 years ago
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I was wondering whether it is possible to determine alternative splicing between samples with Ballgown. With cuffdiff there is the splicing.diff output file, but so far I could only find information o…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/VCCRI/Ularcirc
Confirm the following by editing e…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/DiogoVeiga/maser
Confirm the following by editing…
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Originally reported by: **ggoodwin52 (Bitbucket: [ggoodwin52](https://bitbucket.org/ggoodwin52), GitHub: Unknown)**
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I use projection plots to generate images…
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Hello,
I'm looking to use EventPointer to assess alternate splicing events on Clariom D human. I've read some of the documentation regarding generating a CDF for annotation, however Bioconductor al…