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Hi Tobi,
I am sorry in advance that this will take a bit of time to explain. I'll do my best to keep it brief and explanatory.
I made a couple of changes to make sure the server can be run without a…
meren updated
8 years ago
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Greetings,
I am trying to install anvi'o on Ubuntu 14.04. All dependencies look good (except MyRAST--could not get that working). This is the terminal output when I try to install running sudo pip i…
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Meren et al,
I recently updated Anvio (v1.2.1) on Ubuntu and am re-running some old analysis. A funny error is popping up during anvi-populate-genes-table that I can't figure out. Call and error mes…
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Hi,
I am planning to change the interface code in such a way that if there is a state stored in the profile database with the name "default", it will be automatically loaded and the tree will be draw…
meren updated
8 years ago
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Dear @paczian,
Do you remember the charts page in which you masterfully implemented a D3 trick so we have bootstrap pop up windows to show the annotation of genes? I need your help with one more thin…
meren updated
8 years ago
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Hello,
I'm sorry to trouble you again, but after returning to work with Anvi'o today, the previous installation is not letting me complete tasks any longer.
As of our last outing, you had me complete…
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The way we initialize Django templates will soon be obsolete, and it needs a fix.
To reproduce the problem run the mini test once:
``` bash
cd tests/
./run_mini_test.sh
```
You will get this warnin…
meren updated
8 years ago
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Great work on the Docker image, its nice to see examples!
I've run into a "file not found" type error. Full traceback from the mini_test script below. I thought you might not have updated the docker …
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All dependencies except MyRAST are installed. And Chrome is default browser, the test `python -c 'import webbrowser as w; w.open_new("http://")'` passed.
But running test did not work.
```
git clone…
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Hello,
I've successfully installed anvio (no errors during installation), but running the mini test causes the following problem- it can't be run without sudo, even in my Downloads directory (which is…