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Hello,
I have a data frame that I'm trying to use for plotting using the custom option. My data frame looks like this:
```{r}
> head(shortT001)
sample gene variant_class
1 T001 SCYL3 …
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I am trying to create a prophet object of my data frame by passing grouped data using the following code. Essentially, I would like my predictions at group level, therefore I subset the data frame and…
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At the moment we often don't really know what the segments on plots are, because the y-axis is so zoomed out that we can't see what's going on. This means that we sometimes appear to have a flat line …
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Hi,
I'm trying to understand why it would be desirable to have changepoints spread over the first 80% of the series only.
My naive thought would be that including the possibility of trend change…
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Just ran maftools with codes in R:
data_maf = read.maf("test.maf.txt", useAll = TRUE) and got the error:
NOTE: Missing clinical data! It is strongly recommended to provide clinical data associated…
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i tried to pull a list of genes using a txt using oncoplot:
[tcgalihc_top100mutsig.txt](https://github.com/PoisonAlien/maftools/files/1697699/tcgalihc_top100mutsig.txt)
```
laml = read.maf(maf=ma…
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Hello :)
My sample data is:
```
"ds","y"
2017-01-01,1000
2017-01-02,900
2017-01-03,800
2017-01-04,700
2017-01-05,600
2017-01-06,500
2017-01-07,400
2017-01-08,300
2017-01-08,200
```
My co…
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I'm trying to find the best setting testing a certain set of options:
```
growth = ['linear', 'logistic']
seasonality = [5,10,15,20]
changepoint = [0.01,0.05,0.1]
options = list(itertools.produ…
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Hi @nsong06,
I compiled the changepoint code and ran the following command for processing:
mpirun -np 2 Parallel-GM file.dat 0.05 0.95
But it showed error after checking for the nodes. Here is …
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since update of R to 3.4.3 and Bioconductor to 3.6 (Mac OS X) I am not able to run read.maf anymore. The following message appears:
+ > maf_all **Fehler (=mistake) in read.maf…