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Hi there,
Thanks for developing such a great tool for the community.
I am trying to run the example data and stuck at the very begining. It looks like several of the python scripts begining wi…
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- [ ] [accumulate \(deprecated)](https://github.com/exercism/problem-specifications/tree/main/exercises/accumulate)
- [x] [acronym](https://github.com/exercism/problem-specifications/tree/main/exerci…
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hi,
This is my code. I don't know if this is correct, but my target species is Brassica napus.I wonder if this software only scores intron boundaries, and if there is a filtered result for this score…
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In [rna-seq.tex](https://github.com/klmr/thesis/blob/master/rna-seq.tex) you have excellent discussion of various aspects of expression quantification. I think there are some missing pieces:
- Given t…
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Hello,
I am using PRICE software, it is really a wonderful tool, I have used it to predict ORF of several samples and it works well. Unfortunately, now I encounters a problem when analyzed a sample. …
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**Describe the bug**
The latest build of bioutils does not include the recent work done to add the Human Mitochondrial translation table.
https://github.com/biocommons/bioutils/blob/main/src/biout…
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Clicking on this link shows a long list of presumably gene names followed by some columns, and some of these columns have the number 1 in them. There are not column heads describing what these mean.
…
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Hi,
I am running loftee but while vep is annotating the file loftee does not.
Here is my command
```
/home/hpcc/tools/ensembl-vep/./vep --cache --offline -i Input.vcf --everything --force_over…
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For some ENST numbers and HGNC we run into the error `AttributeError: 'str' object has no attribute 'iteritems'` (whole error at the bottom). This happens because sometimes the `edit_map` becomes an e…
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Hello,
I'm running the AIDE package, which has worked well for 9 bam files, but on the 10th file I'm getting an error and halted execution that I don't fully understand.
Some milestones from out…