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We have a set of BioSamples that we need to update with additional metadata. This ticket is to track my progress on how I would go about doing that. Investigations will occur before I have any real in…
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Hi, @Wytamma
How can I download the data (e.g., H1N1) from the GISAID EpiFlu database using GISAIDR?
Best,
Yang
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Is there currently any support for functions? if so, is there documentation for this? if not, will there be, and when? thanks!
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As revealed by #485 and #510, it is possible for the techmd service to get out of sync with an item (most notably, missing files). To assist with the remediation of these cases, it would be useful to …
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During the last submission, we were unable to add gene information as the validation script found an error in collection_gene.tsv. When we investigated the reason, we found that the file was failing b…
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This command:
$ kraken2-build --standard --db standarddb --use-ftp
Downloading taxonomy tree data...$
stopped several seconds after start. Nothing is downloading.
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Hi，when I run IsoCon，I found the results vary greatly with different --min_candidate_support set. So I wonder how to set this parameter is ok？
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SYSTEM created DOI
BIG TICKET as DOIing methods vary, this is a workshop in itself
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See https://github.com/nextstrain/docs.nextstrain.org/pull/113 for (new) documentation detailing how `augur export v2` treats metadata (TSV and node-data JSONs). Writing those docs allowed me to colle…
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Hi,
I am using the MAESTRO to analyze a scATAC dataset downloaded form SRA database (accession number: SRR10399252), but I met this error:
```
Output file: Result/Mapping/SRR10399252_epilepsy/f…