-
Hello to the pagoo team,
First, my congratulations on the great work made on the development of pagoo R library.
The main question I want to put in this forum is in the following:
1) Is ther…
-
Hi,
Extremely useful extension, thanks for the hard work. I have an issue with numeric styles (e.g. Vancouver). It all looks fine within JupyterLab, but when I tried exporting the notebook to latex…
-
Suppose you had just a bunch of identifiers. You want to see what they have in common. You could do something like a shortest path (if there were 2) but then you want to expand to check other non-pa…
-
Currently in the Edge Explorer modal, for edges we only show their source database. It has been requested that we try and provide more info that we have to the user.
-
## The problem
TreeTime has currently a very rudimentary way of resolving polytomies (multi-furcations in the tree).
When this was initially put in place it was never meant to resolve large polyt…
-
Hi,
Hyphy team.
I'd like to set one or two specific foreground branch to test using BUSTED-MH.
My code is:
**hyphy BUSTED-MH.bf --alignment filter.fasta --tree tree.tre --srv Yes --branch…
-
There's been a lot of interesting progress recently in cellular modeling. In particular, I'm thinking of this paper that creates a deep learned cell simulator:
https://www.nature.com/articles/nmeth…
-
@hardingnj Hi, Nick, Seems I got similar dtype problem with the parameter -R ( --rrate ). My input variation data is vcf.gz format. My code is :
xpclr --format vcf -Sa "....." -Sb "....." -R 2.5…
-
-
Hi @kermitt2
I have now merged with upstream master and during evaluation I found some error cases where the line numbers are not filtered out.
I can confirm that the line numbers are removed f…