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Goal: Finish the trajectories tutorial that currently only runs in Python
Original tutorial [OT]:
https://scanpy-tutorials.readthedocs.io/en/latest/paga-paul15.html
Galaxy tutorial (in Python)…
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We're changing the layout of igraph objects. This leads to check failures in your package, see https://github.com/igraph/rigraph/blob/f-igraph-t-idx-revdepcheck/revdep/problems.md and https://github.c…
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This package does not seem to build with Clang, which is the system compiler on macOS. The build system tries to invoke `cc -print-sysroot`, but this option is specific to GCC and not available with C…
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When installing spapros in a new environment (`conda create -n spapros python=3.9`) via `pip` (`pip install spapros`) `segmentation fault:11` occurs at `sc.pp.neighbors` when running the knn metric ev…
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Dear friends,
I had installed the antismash by conda with "conda install -c bioconda antismash ".
But it was interrupted by a sudden power failure.
and now I get the warnning messages every tim w…
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Hi there,
I'm wondering if there are any plans to add `igraph_get_shortest_path_astar` to python-igraph.
I'm working on an algorithm for AGV path-planning using the A-star algorithm. To reduce t…
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- [ ] I have checked that this issue has not already been reported.
- [ ] I have confirmed this bug exists on the latest version of scanpy.
- [ ] (optional) I have confirmed this bug exists on the m…
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## 🐍 Package Request
- Package Name and Version : igraph / latest
- Package URL : https://github.com/igraph/python-igraph, https://pypi.org/project/igraph/
- Package Dependencies that needs to be…
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Hello, I've been getting error as described below. There were no problems until the step of pyscenic aucell. I'd appreciate if you let me know how to solve the problem. Thank you.
**Steps to reprod…
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seen in https://github.com/sagemath/sage/actions/runs/5349116550/jobs/9699980883?pr=35808
```
Using --optional=debian,pip,sage,sage_spkg
Features to be detected: 4ti2,benzene,bliss,buckygen,conway_…