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Hello,
I am running mixcr 1.7.1 using the command below. I downloaded the human library locally using importFromIMGT.sh. I get this NPE for multiple species downloaded locally:
mixcr align -f -r C…
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**[Original report](https://bitbucket.org/kleinstein/changeo/issues/69) by ssnn (Bitbucket: [ssnn](https://bitbucket.org/ssnn), GitHub: [ssnn-airr](https://github.com/ssnn-airr)).**
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**[Original report](https://bitbucket.org/kleinstein/changeo/issues/67) by Namita Gupta (Bitbucket: [namita1025](https://bitbucket.org/namita1025), GitHub: [namita1025](https://github.com/namita1025))…
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While using exportClones for a mouse TRA experiment, I get proper J alignments but a strange output for **V alignment**:
```
“;;;;”
```
This caused a crash in tcR, as referred to here: https://githu…
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$ mixcr importFromIMGT
Starting importFromIMGT.sh script
By using this script you agree to the terms of use of IMGT website. (see http://www.imgt.org/ for details).
Press ENTER to continue or other ke…
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Hey,
I am trying to analyse data from IMGT, VDJtools allows conversion of IMGT data into the VDJ-format, which in turn I would like to read into R to analyse with tcR. When I run `parse.vdjtools("fil…
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Hi Alex, how can I generate pseduo allele sequence from the reference graph and call variants based on the aligned reads?
I don't know how to interpret the allele clusters reported in R1_bestguess.txt…
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So I was running some VH sequences for testing both the annotation and the partitioning. With 500 sequences both annotation and partitioning works just fine. With 5000 sequences the annotation still w…
krdav updated
8 years ago
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Dear Alexander,
Thank you for making this interesting program.
I meet this following error when I try to compile it:
...
In file included from readFilter/readFilter.cpp:8:0:
readFilter/readFilter.h:1…
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**[Original report](https://bitbucket.org/kleinstein/changeo/issues/54) by David Koppstein (Bitbucket: [dkoppstein](https://bitbucket.org/dkoppstein), GitHub: [dkoppstein](https://github.com/dkoppstei…