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milaboratory
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mixcr
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
https://mixcr.com
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exportAlignments ERROR
#1810
Z-YWJ
opened
8 hours ago
1
Same barcode assigned to two different cellGroups in clones.tsv file from 10X TCR data
#1807
genome2020
closed
1 day ago
1
Regression tests changes in the fix-illumina-layout
#1806
github-actions[bot]
closed
4 days ago
0
Fixed Layout for presets
#1805
mizraelson
closed
3 days ago
0
Regression tests changes in the new-illumina-kit-dna
#1804
github-actions[bot]
closed
5 days ago
0
Regression tests changes in the new-illumina-kit-dna
#1803
github-actions[bot]
closed
5 days ago
0
- added new illumina preset
#1802
mizraelson
closed
5 days ago
0
new Qiagen kits
#1801
mizraelson
closed
5 days ago
0
Regression tests changes in the new-qiagen-kits
#1800
github-actions[bot]
closed
5 days ago
0
N bases
#1799
bshim181
opened
1 week ago
5
Multiple clones per cell barcode
#1794
SirKuikka
closed
2 weeks ago
1
Different alignment rates for MiXCR analyze and MiXCR align
#1793
Januaryyiyue
closed
2 weeks ago
1
Takara Smarter Seq
#1791
bshim181
closed
2 weeks ago
1
Regression tests changes in the align-retry
#1789
github-actions[bot]
closed
2 weeks ago
0
How to set up 'assembly-clonotypes-by' argument?
#1788
omegahh
closed
2 weeks ago
1
Discrepancies between sequencing runs
#1786
bshim181
closed
2 weeks ago
1
Alignment read counts by sample when using input file name expansion
#1783
benjytan88
closed
2 weeks ago
1
feat: do not die in CI when ARCHIVE_PATH is empty
#1781
DenKoren
closed
3 weeks ago
0
Only upto 8 % clonotype exported
#1780
PavithraV0223
closed
3 weeks ago
0
Missing tsv files in MiXCR 4.7.0 output for 10X GEX pipeline
#1778
genome2020
closed
3 weeks ago
1
coveredFeaturesOnExport in specification
#1776
gnefedev
closed
3 weeks ago
0
Regression tests changes in the mitool-tag-types
#1775
github-actions[bot]
closed
3 weeks ago
0
Regression tests changes in the align-retry
#1774
github-actions[bot]
closed
3 weeks ago
0
Align retry
#1773
gnefedev
closed
2 weeks ago
0
Regression tests changes in the mitool-tag-types
#1772
github-actions[bot]
closed
3 weeks ago
0
update pl-package-builder
#1771
DenKoren
closed
3 weeks ago
0
Regression tests changes in the align-retry
#1770
github-actions[bot]
closed
4 weeks ago
0
Regression tests changes in the align-retry
#1769
github-actions[bot]
closed
4 weeks ago
0
neb-mouse-rna-xcr-umi-nebnext QC ALERT
#1767
Victor-K27
closed
4 weeks ago
1
Regression tests changes in the mitool-tag-types
#1766
github-actions[bot]
closed
4 weeks ago
0
Use --sign-command in CI when building mixcr package for Platforma Backend
#1765
DenKoren
closed
1 month ago
0
chore: use --sign-command pl-pkg option
#1764
DenKoren
closed
1 month ago
0
Regression tests changes in the mitool-tag-types
#1763
github-actions[bot]
closed
1 month ago
0
use new pl-package-builder to produce signed packages
#1762
DenKoren
closed
1 month ago
0
mitool tags types
#1758
gnefedev
closed
3 weeks ago
0
Issue of mutationPositionPlot generation
#1757
liu9756
closed
1 month ago
2
Still have question with MiXCR gene library
#1756
omegahh
closed
1 month ago
3
export preset as json
#1755
gnefedev
closed
1 month ago
0
High percentage of alignment failed due to no hits (not TCR/IG?) in 10X TCR data
#1753
genome2020
closed
1 month ago
1
use new version of pl-package-builder
#1752
DenKoren
closed
1 month ago
0
change writer settings
#1751
gnefedev
closed
1 month ago
0
align could track the progress of gz input
#1749
gnefedev
closed
1 month ago
0
Regression tests changes in the sample-sheet-with-mitool
#1748
github-actions[bot]
closed
1 month ago
0
integrate mitool with sample-sheet
#1747
gnefedev
closed
1 month ago
0
Pack software package for Platforma Backend.
#1743
DenKoren
closed
1 month ago
0
Pack software package for Platforma Backend.
#1742
DenKoren
closed
1 month ago
0
4.7.0 last checks
#1741
dbolotin
closed
1 month ago
0
Regression tests changes in the 4-7-0-RC-plus-mitool-integration
#1740
github-actions[bot]
closed
1 month ago
0
4 7 0 rc plus mitool integration
#1739
gnefedev
closed
1 month ago
0
Pre-Clonotypes
#1735
bshim181
closed
1 month ago
1
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