milaboratory mixcr issues

milaboratory / mixcr

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

https://mixcr.com

Other

336 stars 79 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

feat: do not die in CI when ARCHIVE_PATH is empty

#1781 DenKoren closed 2 months ago
0
Only upto 8 % clonotype exported

#1780 PavithraV0223 closed 2 months ago
0
Missing tsv files in MiXCR 4.7.0 output for 10X GEX pipeline

#1778 genome2020 closed 2 months ago
1
coveredFeaturesOnExport in specification

#1776 gnefedev closed 2 months ago
0
Regression tests changes in the mitool-tag-types

#1775 github-actions[bot] closed 2 months ago
0
Regression tests changes in the align-retry

#1774 github-actions[bot] closed 2 months ago
0
Align retry

#1773 gnefedev closed 2 months ago
0
Regression tests changes in the mitool-tag-types

#1772 github-actions[bot] closed 2 months ago
0
update pl-package-builder

#1771 DenKoren closed 2 months ago
0
Regression tests changes in the align-retry

#1770 github-actions[bot] closed 2 months ago
0
Regression tests changes in the align-retry

#1769 github-actions[bot] closed 2 months ago
0
neb-mouse-rna-xcr-umi-nebnext QC ALERT

#1767 Victor-K27 closed 2 months ago
1
Regression tests changes in the mitool-tag-types

#1766 github-actions[bot] closed 2 months ago
0
Use --sign-command in CI when building mixcr package for Platforma Backend

#1765 DenKoren closed 2 months ago
0
chore: use --sign-command pl-pkg option

#1764 DenKoren closed 2 months ago
0
Regression tests changes in the mitool-tag-types

#1763 github-actions[bot] closed 2 months ago
0
use new pl-package-builder to produce signed packages

#1762 DenKoren closed 2 months ago
0
mitool tags types

#1758 gnefedev closed 2 months ago
0
Issue of mutationPositionPlot generation

#1757 liu9756 closed 3 months ago
2
Still have question with MiXCR gene library

#1756 omegahh closed 3 months ago
3
export preset as json

#1755 gnefedev closed 3 months ago
0
High percentage of alignment failed due to no hits (not TCR/IG?) in 10X TCR data

#1753 genome2020 closed 3 months ago
1
use new version of pl-package-builder

#1752 DenKoren closed 2 months ago
0
change writer settings

#1751 gnefedev closed 3 months ago
0
align could track the progress of gz input

#1749 gnefedev closed 3 months ago
0
Regression tests changes in the sample-sheet-with-mitool

#1748 github-actions[bot] closed 3 months ago
0
integrate mitool with sample-sheet

#1747 gnefedev closed 3 months ago
0
Pack software package for Platforma Backend.

#1743 DenKoren closed 3 months ago
0
Pack software package for Platforma Backend.

#1742 DenKoren closed 3 months ago
0
4.7.0 last checks

#1741 dbolotin closed 3 months ago
0
Regression tests changes in the 4-7-0-RC-plus-mitool-integration

#1740 github-actions[bot] closed 3 months ago
0
4 7 0 rc plus mitool integration

#1739 gnefedev closed 3 months ago
0
Pre-Clonotypes

#1735 bshim181 closed 3 months ago
1
Han el all preset

#1733 alexell22 closed 3 months ago
5
overlapScatterPlot output correlation coefficient and p values

#1729 lauratwomey closed 3 months ago
0
QIAgen Targeted library

#1728 GabyBG closed 3 months ago
1
Downsampling output missing

#1727 lauratwomey closed 3 months ago
0
when I used mixcr to analyze RNAseq data, there was an error "unknown options"

#1724 Henry-zhang-For closed 3 months ago
1
Regression tests changes in the cellecta-spike-in-presets

#1723 github-actions[bot] closed 4 months ago
0
cellecta spike in presets

#1722 mizraelson closed 3 months ago
0
Long CDR3 sequences

#1721 Januaryyiyue closed 3 months ago
1
Regression tests changes in the 4-7-0-RC-plus-mitool-integration

#1720 github-actions[bot] closed 4 months ago
0
Importing new whitelist for parsebio protocols

#1719 NBurnaevskiy closed 2 months ago
8
keep tags from sample sheet

#1714 gnefedev closed 4 months ago
0
ERROR: picocli.CommandLine$ExecutionException: Error while running command align java.lang.IllegalStateException: Check failed.

#1713 liu9756 closed 4 months ago
6
Question: Does mixcr take sequence stagger into consideration?

#1710 omegahh closed 4 months ago
1
Runtime error of "Can't apply step BuildingInitialTrees" when running findShmTrees

#1708 omegahh closed 4 months ago
3
`Feature for allele search doesn't intersect JGene` error when running `findAlleles`

#1706 michael-ford closed 5 months ago
1
Postanalysis output explanation

#1705 pbpayal closed 4 months ago
3
fix bam

#1701 gnefedev closed 5 months ago
0

Previous Next