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Thank you so much for creating this pipeline. I have successfully used it for fungal and bacterial sequences. Unfortunately, when I tried to assign taxonomy for insect COI sequences from both MIDORI l…
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Name of the game: Fedit
Steam ID: No Steam
Game version: 1.0
Game Type (native/proton/wine): Wine
Proton/Wine version: wine-7.2 (Staging)
Wheel Model: OpenFFBoard (https://github.com/Ultrawipf/Op…
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Creating this thread to post potentially useful info about _Pichia pastoris_/_Komagataella phaffii_ that people come across.
Quick background: _Pichia pastoris_ (now named _Komagataella phaffii_) i…
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Hi Tobias,
Could you kindly help me with the following 2 questions?
1. The slam-seq library was prepared with Lexogen kits and should used single-end sequencing. But the sequencing center returned…
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https://ncbiinsights.ncbi.nlm.nih.gov/2023/05/04/remap-tool-to-retire/
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Hello,
I have been very much enjoying working with dada2 and have successfully used it for a couple of smaller projects.
We just got PacBio long-read sequences back which I have been trying to proce…
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We resubmitted version [0.10](https://github.com/greenelab/deep-review/releases/tag/v0.10) to the _Journal of the Royal Society Interface_ and *bioRxiv*. Thanks everyone for all the great work on the…
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Will it be possible to use flexiplex to demultiplex reads with the following patter where we will have two different barcode files. We want thee output compatible with FLAMES
`-x [flank1] -b ??????…
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This post builds on #21 in particular.
This might be out of line with how some imagine this system working, but my hope is that it's a step toward creating a non-governmental system that can effectiv…
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I'm currently struggling to work out true conversion rates of an experiment and some of the mutiqc reports (i.e. rates and UTR rates) show much higher than expected conversion rates even for the contr…