-
Hi iquasere,
Sorry to trouble you again, Here I still encounter another new problem after running almost 2 days later.
....
5500000 alignment record pairs processed.
5600000 alignment recor…
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/grisslab/scAnnotatR
Confirm the following by edit…
nttvy updated
2 years ago
-
I'm executing `hyperR` with a custom geneset and `"kstest"` weighted by the effect size of a differential expression test. I've noticed, however, that the results I get in `hyp_obj$data` and the dots …
-
Hi @timoast ,
what way i can use on our ATAC data create by 10xGenomics cellrabger-atac pipeline?
In your Signac pipeline, It just combined two sample ATAC into one ?
and how to integr…
-
Potentially very useful. Not sure why we don't have it yet... Maybe too many? Probably make sense to activate once we have a proper UI for the filters.
-
Hi,
Thanks for developing Seurat, such a great tool for single cell data analysis.
I am working on the spatial transcritpome data and using "FindSpatiallyVariableFeatures" to find clusters specifi…
-
Hi all,
Great work you've been doing on cellxgene. It's been very useful to communication scRNA-seq analysis with our experimental collaborators.
I wanted to put an idea out there for how one co…
-
Has anyone performed pseudotemporal ordering analysis with Monocle 3 using an object made from Seurat 3's integration function?
I'm wondering if designating only 2000 features for the integration …
-
https://mp.weixin.qq.com/s/ypXTR4hO2uDe5S-JHJsttQ
ixxmu updated
3 years ago
-
From a data analysis an statistical point of view, we would greatly benefit from having the concentration measurements of all the _replicates_ rather than a summary statistic (e.g. mean, std dev). Thi…